Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-54A0A075B5W5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ighv1-54A0A075B5W5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.31■□□□□ 0.36
Ighv1-54A0A075B5W5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-54A0A075B5W5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-54A0A075B5W5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.31■□□□□ 0.36
Ighv1-54A0A075B5W5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Ighv1-54A0A075B5W5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.31■□□□□ 0.36
Ighv1-54A0A075B5W5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ighv1-54A0A075B5W5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Gm43060-201ENSMUST00000200621 289 ntBASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-54A0A075B5W5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-54A0A075B5W5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-54A0A075B5W5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-54A0A075B5W5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ighv1-54A0A075B5W5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-54A0A075B5W5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.29■□□□□ 0.36
Ighv1-54A0A075B5W5 Gm27801-201ENSMUST00000184174 223 ntBASIC17.29■□□□□ 0.36
Ighv1-54A0A075B5W5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-54A0A075B5W5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-54A0A075B5W5 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.27■□□□□ 0.36
Ighv1-54A0A075B5W5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-54A0A075B5W5 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.27■□□□□ 0.36
Ighv1-54A0A075B5W5 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.27■□□□□ 0.36
Ighv1-54A0A075B5W5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.27■□□□□ 0.36
Ighv1-54A0A075B5W5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.27■□□□□ 0.36
Ighv1-54A0A075B5W5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-54A0A075B5W5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-54A0A075B5W5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-54A0A075B5W5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-54A0A075B5W5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-54A0A075B5W5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-54A0A075B5W5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Ighv1-54A0A075B5W5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-54A0A075B5W5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-54A0A075B5W5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-54A0A075B5W5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Ighv1-54A0A075B5W5 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.26■□□□□ 0.35
Ighv1-54A0A075B5W5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-54A0A075B5W5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Ighv1-54A0A075B5W5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-54A0A075B5W5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-54A0A075B5W5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Ighv1-54A0A075B5W5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ighv1-54A0A075B5W5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-54A0A075B5W5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-54A0A075B5W5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-54A0A075B5W5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-54A0A075B5W5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.25■□□□□ 0.35
Ighv1-54A0A075B5W5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.25■□□□□ 0.35
Ighv1-54A0A075B5W5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-54A0A075B5W5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-54A0A075B5W5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-54A0A075B5W5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-54A0A075B5W5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-54A0A075B5W5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-54A0A075B5W5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms