Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv4A0A075B5I2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv4A0A075B5I2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv4A0A075B5I2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv4A0A075B5I2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv4A0A075B5I2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv4A0A075B5I2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv4A0A075B5I2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv4A0A075B5I2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv4A0A075B5I2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv4A0A075B5I2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv4A0A075B5I2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.44■□□□□ 0.7
Trbv4A0A075B5I2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv4A0A075B5I2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Gm12821-201ENSMUST00000120022 600 ntBASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Gm27454-201ENSMUST00000185090 204 ntBASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv4A0A075B5I2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv4A0A075B5I2 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.42■□□□□ 0.7
Trbv4A0A075B5I2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv4A0A075B5I2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv4A0A075B5I2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trbv4A0A075B5I2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trbv4A0A075B5I2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv4A0A075B5I2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Gm43173-201ENSMUST00000202246 593 ntBASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv4A0A075B5I2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trbv4A0A075B5I2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Trbv4A0A075B5I2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trbv4A0A075B5I2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trbv4A0A075B5I2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv4A0A075B5I2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv4A0A075B5I2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.39■□□□□ 0.69
Trbv4A0A075B5I2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv4A0A075B5I2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv4A0A075B5I2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv4A0A075B5I2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv4A0A075B5I2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms