Protein–RNA interactions for Protein: Q9Z2D7

Mbd4, Methyl-CpG-binding domain protein 4, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd4Q9Z2D7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mbd4Q9Z2D7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mbd4Q9Z2D7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mbd4Q9Z2D7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.88■□□□□ 0.61
Mbd4Q9Z2D7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Mbd4Q9Z2D7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Mbd4Q9Z2D7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mbd4Q9Z2D7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mbd4Q9Z2D7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mbd4Q9Z2D7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Mbd4Q9Z2D7 AA386476-201ENSMUST00000098781 1665 ntBASIC18.87■□□□□ 0.61
Mbd4Q9Z2D7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mbd4Q9Z2D7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.86■□□□□ 0.61
Mbd4Q9Z2D7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mbd4Q9Z2D7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.86■□□□□ 0.61
Mbd4Q9Z2D7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Mbd4Q9Z2D7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mbd4Q9Z2D7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mbd4Q9Z2D7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mbd4Q9Z2D7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.84■□□□□ 0.61
Mbd4Q9Z2D7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mbd4Q9Z2D7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mbd4Q9Z2D7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Mbd4Q9Z2D7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.83■□□□□ 0.6
Mbd4Q9Z2D7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Mbd4Q9Z2D7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mbd4Q9Z2D7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mbd4Q9Z2D7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.83■□□□□ 0.6
Mbd4Q9Z2D7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd4Q9Z2D7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.82■□□□□ 0.6
Mbd4Q9Z2D7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd4Q9Z2D7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd4Q9Z2D7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd4Q9Z2D7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.82■□□□□ 0.6
Mbd4Q9Z2D7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd4Q9Z2D7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd4Q9Z2D7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd4Q9Z2D7 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.82■□□□□ 0.6
Mbd4Q9Z2D7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd4Q9Z2D7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd4Q9Z2D7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd4Q9Z2D7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd4Q9Z2D7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Mbd4Q9Z2D7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd4Q9Z2D7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd4Q9Z2D7 Gm7514-201ENSMUST00000209475 934 ntBASIC18.81■□□□□ 0.6
Mbd4Q9Z2D7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd4Q9Z2D7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd4Q9Z2D7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd4Q9Z2D7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd4Q9Z2D7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.8■□□□□ 0.6
Mbd4Q9Z2D7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd4Q9Z2D7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.8■□□□□ 0.6
Mbd4Q9Z2D7 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.8■□□□□ 0.6
Mbd4Q9Z2D7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd4Q9Z2D7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd4Q9Z2D7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd4Q9Z2D7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd4Q9Z2D7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd4Q9Z2D7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd4Q9Z2D7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mbd4Q9Z2D7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Mbd4Q9Z2D7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Mbd4Q9Z2D7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mbd4Q9Z2D7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms