Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ap4s1Q9WVL1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ap4s1Q9WVL1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ap4s1Q9WVL1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ap4s1Q9WVL1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ap4s1Q9WVL1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ap4s1Q9WVL1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.6■□□□□ 0.57
Ap4s1Q9WVL1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Ap4s1Q9WVL1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ap4s1Q9WVL1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ap4s1Q9WVL1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ap4s1Q9WVL1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ap4s1Q9WVL1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.59■□□□□ 0.57
Ap4s1Q9WVL1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ap4s1Q9WVL1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ap4s1Q9WVL1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ap4s1Q9WVL1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ap4s1Q9WVL1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ap4s1Q9WVL1 Mir6236-201ENSMUST00000184437 123 ntBASIC18.58■□□□□ 0.56
Ap4s1Q9WVL1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.58■□□□□ 0.56
Ap4s1Q9WVL1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ap4s1Q9WVL1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.58■□□□□ 0.56
Ap4s1Q9WVL1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.58■□□□□ 0.56
Ap4s1Q9WVL1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ap4s1Q9WVL1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ap4s1Q9WVL1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Gm7143-201ENSMUST00000222811 859 ntBASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 BC021767-201ENSMUST00000126387 1716 ntBASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ap4s1Q9WVL1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Rarb-207ENSMUST00000225921 2756 ntBASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ap4s1Q9WVL1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ap4s1Q9WVL1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ap4s1Q9WVL1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ap4s1Q9WVL1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ap4s1Q9WVL1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ap4s1Q9WVL1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ap4s1Q9WVL1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ap4s1Q9WVL1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.54■□□□□ 0.56
Ap4s1Q9WVL1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.54■□□□□ 0.56
Ap4s1Q9WVL1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ap4s1Q9WVL1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms