Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Scn8aQ9WTU3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn8aQ9WTU3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn8aQ9WTU3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn8aQ9WTU3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Scn8aQ9WTU3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.77■□□□□ 0.76
Scn8aQ9WTU3 Gm37179-201ENSMUST00000194862 823 ntBASIC19.77■□□□□ 0.76
Scn8aQ9WTU3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn8aQ9WTU3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.77■□□□□ 0.76
Scn8aQ9WTU3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn8aQ9WTU3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.77■□□□□ 0.76
Scn8aQ9WTU3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn8aQ9WTU3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn8aQ9WTU3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn8aQ9WTU3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn8aQ9WTU3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Scn8aQ9WTU3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Scn8aQ9WTU3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn8aQ9WTU3 Gm38205-201ENSMUST00000192243 258 ntBASIC19.76■□□□□ 0.75
Scn8aQ9WTU3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.76■□□□□ 0.75
Scn8aQ9WTU3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn8aQ9WTU3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.76■□□□□ 0.75
Scn8aQ9WTU3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn8aQ9WTU3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Gm18671-201ENSMUST00000214826 683 ntBASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Gm7291-201ENSMUST00000199147 382 ntBASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Gm42569-201ENSMUST00000200539 472 ntBASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn8aQ9WTU3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.74■□□□□ 0.75
Scn8aQ9WTU3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Scn8aQ9WTU3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn8aQ9WTU3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Scn8aQ9WTU3 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.73■□□□□ 0.75
Scn8aQ9WTU3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn8aQ9WTU3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn8aQ9WTU3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn8aQ9WTU3 Gm42778-201ENSMUST00000199644 553 ntBASIC19.73■□□□□ 0.75
Scn8aQ9WTU3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn8aQ9WTU3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Scn8aQ9WTU3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn8aQ9WTU3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.72■□□□□ 0.75
Scn8aQ9WTU3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Scn8aQ9WTU3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.72■□□□□ 0.75
Scn8aQ9WTU3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn8aQ9WTU3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn8aQ9WTU3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Scn8aQ9WTU3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.72■□□□□ 0.75
Scn8aQ9WTU3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.72■□□□□ 0.75
Scn8aQ9WTU3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.71■□□□□ 0.75
Scn8aQ9WTU3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn8aQ9WTU3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn8aQ9WTU3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn8aQ9WTU3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn8aQ9WTU3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scn8aQ9WTU3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Scn8aQ9WTU3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.71■□□□□ 0.75
Scn8aQ9WTU3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Scn8aQ9WTU3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn8aQ9WTU3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Gm7860-201ENSMUST00000121190 879 ntBASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Scn8aQ9WTU3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn8aQ9WTU3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms