Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 Gm13168-201ENSMUST00000121771 632 ntBASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Col13a1Q9R1N9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col13a1Q9R1N9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col13a1Q9R1N9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col13a1Q9R1N9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col13a1Q9R1N9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col13a1Q9R1N9 Gm10812-201ENSMUST00000099864 546 ntBASIC16.46■□□□□ 0.23
Col13a1Q9R1N9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col13a1Q9R1N9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col13a1Q9R1N9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Col13a1Q9R1N9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col13a1Q9R1N9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col13a1Q9R1N9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col13a1Q9R1N9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col13a1Q9R1N9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Col13a1Q9R1N9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col13a1Q9R1N9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col13a1Q9R1N9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col13a1Q9R1N9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col13a1Q9R1N9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col13a1Q9R1N9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col13a1Q9R1N9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col13a1Q9R1N9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col13a1Q9R1N9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.44■□□□□ 0.22
Col13a1Q9R1N9 Gm5408-201ENSMUST00000197998 747 ntBASIC16.44■□□□□ 0.22
Col13a1Q9R1N9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col13a1Q9R1N9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.44■□□□□ 0.22
Col13a1Q9R1N9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col13a1Q9R1N9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col13a1Q9R1N9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col13a1Q9R1N9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col13a1Q9R1N9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col13a1Q9R1N9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col13a1Q9R1N9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms