Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nubp1Q9R060 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nubp1Q9R060 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.93■□□□□ 0.3
Nubp1Q9R060 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.93■□□□□ 0.3
Nubp1Q9R060 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nubp1Q9R060 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nubp1Q9R060 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nubp1Q9R060 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.93■□□□□ 0.3
Nubp1Q9R060 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nubp1Q9R060 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nubp1Q9R060 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Gm5408-201ENSMUST00000197998 747 ntBASIC16.91■□□□□ 0.3
Nubp1Q9R060 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.91■□□□□ 0.3
Nubp1Q9R060 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nubp1Q9R060 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nubp1Q9R060 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nubp1Q9R060 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nubp1Q9R060 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.9■□□□□ 0.3
Nubp1Q9R060 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nubp1Q9R060 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Nubp1Q9R060 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nubp1Q9R060 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nubp1Q9R060 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nubp1Q9R060 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.89■□□□□ 0.29
Nubp1Q9R060 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nubp1Q9R060 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nubp1Q9R060 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.89■□□□□ 0.29
Nubp1Q9R060 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nubp1Q9R060 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.89■□□□□ 0.29
Nubp1Q9R060 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.89■□□□□ 0.29
Nubp1Q9R060 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nubp1Q9R060 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nubp1Q9R060 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nubp1Q9R060 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nubp1Q9R060 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.88■□□□□ 0.29
Nubp1Q9R060 Gm20049-201ENSMUST00000219950 730 ntBASIC16.88■□□□□ 0.29
Nubp1Q9R060 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.88■□□□□ 0.29
Nubp1Q9R060 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.88■□□□□ 0.29
Nubp1Q9R060 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nubp1Q9R060 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nubp1Q9R060 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.87■□□□□ 0.29
Nubp1Q9R060 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nubp1Q9R060 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms