Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chaf1aQ9QWF0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chaf1aQ9QWF0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.67■■□□□ 1.06
Chaf1aQ9QWF0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chaf1aQ9QWF0 Gm14117-201ENSMUST00000122417 843 ntBASIC21.67■■□□□ 1.06
Chaf1aQ9QWF0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Chaf1aQ9QWF0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chaf1aQ9QWF0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chaf1aQ9QWF0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.67■■□□□ 1.06
Chaf1aQ9QWF0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.66■■□□□ 1.06
Chaf1aQ9QWF0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chaf1aQ9QWF0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Chaf1aQ9QWF0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.65■■□□□ 1.06
Chaf1aQ9QWF0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chaf1aQ9QWF0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.65■■□□□ 1.06
Chaf1aQ9QWF0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chaf1aQ9QWF0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chaf1aQ9QWF0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chaf1aQ9QWF0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chaf1aQ9QWF0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chaf1aQ9QWF0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chaf1aQ9QWF0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chaf1aQ9QWF0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.64■■□□□ 1.05
Chaf1aQ9QWF0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.64■■□□□ 1.05
Chaf1aQ9QWF0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chaf1aQ9QWF0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.64■■□□□ 1.05
Chaf1aQ9QWF0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.64■■□□□ 1.05
Chaf1aQ9QWF0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chaf1aQ9QWF0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chaf1aQ9QWF0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chaf1aQ9QWF0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chaf1aQ9QWF0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chaf1aQ9QWF0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.62■■□□□ 1.05
Chaf1aQ9QWF0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chaf1aQ9QWF0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chaf1aQ9QWF0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chaf1aQ9QWF0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Chaf1aQ9QWF0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chaf1aQ9QWF0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chaf1aQ9QWF0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Chaf1aQ9QWF0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Chaf1aQ9QWF0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chaf1aQ9QWF0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.61■■□□□ 1.05
Chaf1aQ9QWF0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chaf1aQ9QWF0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chaf1aQ9QWF0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chaf1aQ9QWF0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chaf1aQ9QWF0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.6■■□□□ 1.05
Chaf1aQ9QWF0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chaf1aQ9QWF0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.6■■□□□ 1.05
Chaf1aQ9QWF0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chaf1aQ9QWF0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chaf1aQ9QWF0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chaf1aQ9QWF0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chaf1aQ9QWF0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chaf1aQ9QWF0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.59■■□□□ 1.05
Chaf1aQ9QWF0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
Chaf1aQ9QWF0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Chaf1aQ9QWF0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chaf1aQ9QWF0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chaf1aQ9QWF0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chaf1aQ9QWF0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chaf1aQ9QWF0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Chaf1aQ9QWF0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chaf1aQ9QWF0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chaf1aQ9QWF0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
Chaf1aQ9QWF0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Chaf1aQ9QWF0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chaf1aQ9QWF0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.58■■□□□ 1.04
Chaf1aQ9QWF0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chaf1aQ9QWF0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chaf1aQ9QWF0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chaf1aQ9QWF0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chaf1aQ9QWF0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Chaf1aQ9QWF0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chaf1aQ9QWF0 Gm45102-201ENSMUST00000207427 857 ntBASIC21.57■■□□□ 1.04
Chaf1aQ9QWF0 Rps24-207ENSMUST00000224568 714 ntBASIC21.57■■□□□ 1.04
Chaf1aQ9QWF0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms