Protein–RNA interactions for Protein: Q9JJY3

Smpd3, Sphingomyelin phosphodiesterase 3, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd3Q9JJY3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smpd3Q9JJY3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smpd3Q9JJY3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.74■□□□□ 0.59
Smpd3Q9JJY3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smpd3Q9JJY3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smpd3Q9JJY3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smpd3Q9JJY3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smpd3Q9JJY3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.72■□□□□ 0.59
Smpd3Q9JJY3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smpd3Q9JJY3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smpd3Q9JJY3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
Smpd3Q9JJY3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smpd3Q9JJY3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Smpd3Q9JJY3 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.72■□□□□ 0.59
Smpd3Q9JJY3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smpd3Q9JJY3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.72■□□□□ 0.59
Smpd3Q9JJY3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpd3Q9JJY3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpd3Q9JJY3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpd3Q9JJY3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smpd3Q9JJY3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpd3Q9JJY3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smpd3Q9JJY3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Smpd3Q9JJY3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.7■□□□□ 0.58
Smpd3Q9JJY3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smpd3Q9JJY3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Smpd3Q9JJY3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smpd3Q9JJY3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smpd3Q9JJY3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smpd3Q9JJY3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smpd3Q9JJY3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smpd3Q9JJY3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smpd3Q9JJY3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smpd3Q9JJY3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smpd3Q9JJY3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Gm9847-201ENSMUST00000052528 599 ntBASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smpd3Q9JJY3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpd3Q9JJY3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpd3Q9JJY3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpd3Q9JJY3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpd3Q9JJY3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smpd3Q9JJY3 Gm13241-201ENSMUST00000094493 780 ntBASIC18.67■□□□□ 0.58
Smpd3Q9JJY3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.67■□□□□ 0.58
Smpd3Q9JJY3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpd3Q9JJY3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpd3Q9JJY3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 Gm12922-201ENSMUST00000120626 809 ntBASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smpd3Q9JJY3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms