Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.54■□□□□ 0.24
Rbfox1Q9JJ43 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rbfox1Q9JJ43 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rbfox1Q9JJ43 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.53■□□□□ 0.24
Rbfox1Q9JJ43 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rbfox1Q9JJ43 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rbfox1Q9JJ43 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rbfox1Q9JJ43 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rbfox1Q9JJ43 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rbfox1Q9JJ43 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rbfox1Q9JJ43 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rbfox1Q9JJ43 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rbfox1Q9JJ43 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rbfox1Q9JJ43 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rbfox1Q9JJ43 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rbfox1Q9JJ43 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rbfox1Q9JJ43 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rbfox1Q9JJ43 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.51■□□□□ 0.23
Rbfox1Q9JJ43 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rbfox1Q9JJ43 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rbfox1Q9JJ43 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rbfox1Q9JJ43 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rbfox1Q9JJ43 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rbfox1Q9JJ43 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.48■□□□□ 0.23
Rbfox1Q9JJ43 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.48■□□□□ 0.23
Rbfox1Q9JJ43 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rbfox1Q9JJ43 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rbfox1Q9JJ43 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rbfox1Q9JJ43 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rbfox1Q9JJ43 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rbfox1Q9JJ43 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rbfox1Q9JJ43 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rbfox1Q9JJ43 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.47■□□□□ 0.23
Rbfox1Q9JJ43 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rbfox1Q9JJ43 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rbfox1Q9JJ43 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.47■□□□□ 0.23
Rbfox1Q9JJ43 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rbfox1Q9JJ43 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rbfox1Q9JJ43 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rbfox1Q9JJ43 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 Gm9959-201ENSMUST00000068277 390 ntBASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rbfox1Q9JJ43 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rbfox1Q9JJ43 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rbfox1Q9JJ43 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rbfox1Q9JJ43 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rbfox1Q9JJ43 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rbfox1Q9JJ43 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.45■□□□□ 0.22
Rbfox1Q9JJ43 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rbfox1Q9JJ43 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.45■□□□□ 0.22
Rbfox1Q9JJ43 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rbfox1Q9JJ43 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rbfox1Q9JJ43 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms