Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpxQ9JHS4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ClpxQ9JHS4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ClpxQ9JHS4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ClpxQ9JHS4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ClpxQ9JHS4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ClpxQ9JHS4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Gm22238-201ENSMUST00000175222 88 ntBASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ClpxQ9JHS4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.66■□□□□ 0.42
ClpxQ9JHS4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpxQ9JHS4 Golph3-205ENSMUST00000228671 2842 ntBASIC17.65■□□□□ 0.42
ClpxQ9JHS4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpxQ9JHS4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpxQ9JHS4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpxQ9JHS4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ClpxQ9JHS4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ClpxQ9JHS4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.65■□□□□ 0.42
ClpxQ9JHS4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ClpxQ9JHS4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ClpxQ9JHS4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ClpxQ9JHS4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ClpxQ9JHS4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ClpxQ9JHS4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpxQ9JHS4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
ClpxQ9JHS4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpxQ9JHS4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpxQ9JHS4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.64■□□□□ 0.41
ClpxQ9JHS4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.64■□□□□ 0.41
ClpxQ9JHS4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpxQ9JHS4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpxQ9JHS4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpxQ9JHS4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ClpxQ9JHS4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClpxQ9JHS4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ClpxQ9JHS4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ClpxQ9JHS4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ClpxQ9JHS4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.63■□□□□ 0.41
ClpxQ9JHS4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ClpxQ9JHS4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ClpxQ9JHS4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.62■□□□□ 0.41
ClpxQ9JHS4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpxQ9JHS4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpxQ9JHS4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpxQ9JHS4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ClpxQ9JHS4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ClpxQ9JHS4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpxQ9JHS4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ClpxQ9JHS4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpxQ9JHS4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms