Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.67■□□□□ 0.9
Rtn3Q9ES97 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn3Q9ES97 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn3Q9ES97 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
Rtn3Q9ES97 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtn3Q9ES97 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn3Q9ES97 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn3Q9ES97 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.66■□□□□ 0.9
Rtn3Q9ES97 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rtn3Q9ES97 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn3Q9ES97 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn3Q9ES97 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn3Q9ES97 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn3Q9ES97 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rtn3Q9ES97 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn3Q9ES97 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rtn3Q9ES97 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtn3Q9ES97 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rtn3Q9ES97 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rtn3Q9ES97 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rtn3Q9ES97 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rtn3Q9ES97 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rtn3Q9ES97 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rtn3Q9ES97 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rtn3Q9ES97 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rtn3Q9ES97 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rtn3Q9ES97 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.64■□□□□ 0.89
Rtn3Q9ES97 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.64■□□□□ 0.89
Rtn3Q9ES97 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rtn3Q9ES97 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Rtn3Q9ES97 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtn3Q9ES97 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Rtn3Q9ES97 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtn3Q9ES97 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rtn3Q9ES97 Gm8493-201ENSMUST00000196881 489 ntBASIC20.62■□□□□ 0.89
Rtn3Q9ES97 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Rtn3Q9ES97 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rtn3Q9ES97 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtn3Q9ES97 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rtn3Q9ES97 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn3Q9ES97 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn3Q9ES97 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rtn3Q9ES97 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn3Q9ES97 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn3Q9ES97 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn3Q9ES97 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn3Q9ES97 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn3Q9ES97 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rtn3Q9ES97 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rtn3Q9ES97 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn3Q9ES97 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn3Q9ES97 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.6■□□□□ 0.89
Rtn3Q9ES97 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn3Q9ES97 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn3Q9ES97 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn3Q9ES97 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn3Q9ES97 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn3Q9ES97 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Rtn3Q9ES97 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn3Q9ES97 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms