Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r40Q9EQ46 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r40Q9EQ46 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r40Q9EQ46 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Vmn1r40Q9EQ46 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r40Q9EQ46 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vmn1r40Q9EQ46 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.43■□□□□ 0.54
Vmn1r40Q9EQ46 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r40Q9EQ46 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r40Q9EQ46 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.43■□□□□ 0.54
Vmn1r40Q9EQ46 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r40Q9EQ46 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r40Q9EQ46 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vmn1r40Q9EQ46 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Vmn1r40Q9EQ46 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r40Q9EQ46 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r40Q9EQ46 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r40Q9EQ46 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r40Q9EQ46 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Vmn1r40Q9EQ46 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.41■□□□□ 0.54
Vmn1r40Q9EQ46 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vmn1r40Q9EQ46 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vmn1r40Q9EQ46 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vmn1r40Q9EQ46 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vmn1r40Q9EQ46 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r40Q9EQ46 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r40Q9EQ46 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.38■□□□□ 0.53
Vmn1r40Q9EQ46 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r40Q9EQ46 Gm7514-201ENSMUST00000209475 934 ntBASIC18.38■□□□□ 0.53
Vmn1r40Q9EQ46 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r40Q9EQ46 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r40Q9EQ46 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r40Q9EQ46 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r40Q9EQ46 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vmn1r40Q9EQ46 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vmn1r40Q9EQ46 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vmn1r40Q9EQ46 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms