Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.06■□□□□ 0.32
Mmp1bQ9EPL6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp1bQ9EPL6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Mmp1bQ9EPL6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp1bQ9EPL6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp1bQ9EPL6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp1bQ9EPL6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Mir6236-201ENSMUST00000184437 123 ntBASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Mmp1bQ9EPL6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Gm14117-201ENSMUST00000122417 843 ntBASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mmp1bQ9EPL6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Mmp1bQ9EPL6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp1bQ9EPL6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp1bQ9EPL6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp1bQ9EPL6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp1bQ9EPL6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Mmp1bQ9EPL6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp1bQ9EPL6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Mmp1bQ9EPL6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp1bQ9EPL6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp1bQ9EPL6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp1bQ9EPL6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mmp1bQ9EPL6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp1bQ9EPL6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Mmp1bQ9EPL6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp1bQ9EPL6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp1bQ9EPL6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp1bQ9EPL6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mmp1bQ9EPL6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17■□□□□ 0.31
Mmp1bQ9EPL6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp1bQ9EPL6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms