Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.08■□□□□ 0.65
Rrp8Q9DB85 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rrp8Q9DB85 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.08■□□□□ 0.64
Rrp8Q9DB85 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rrp8Q9DB85 Gm38205-201ENSMUST00000192243 258 ntBASIC19.08■□□□□ 0.64
Rrp8Q9DB85 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rrp8Q9DB85 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rrp8Q9DB85 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rrp8Q9DB85 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Rrp8Q9DB85 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rrp8Q9DB85 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rrp8Q9DB85 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Rrp8Q9DB85 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rrp8Q9DB85 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.05■□□□□ 0.64
Rrp8Q9DB85 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rrp8Q9DB85 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rrp8Q9DB85 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.05■□□□□ 0.64
Rrp8Q9DB85 Gm22240-201ENSMUST00000175225 82 ntBASIC19.05■□□□□ 0.64
Rrp8Q9DB85 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.05■□□□□ 0.64
Rrp8Q9DB85 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.05■□□□□ 0.64
Rrp8Q9DB85 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rrp8Q9DB85 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rrp8Q9DB85 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rrp8Q9DB85 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rrp8Q9DB85 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rrp8Q9DB85 Gm6420-201ENSMUST00000193885 723 ntBASIC19.04■□□□□ 0.64
Rrp8Q9DB85 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rrp8Q9DB85 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rrp8Q9DB85 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rrp8Q9DB85 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.04■□□□□ 0.64
Rrp8Q9DB85 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rrp8Q9DB85 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rrp8Q9DB85 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rrp8Q9DB85 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Rrp8Q9DB85 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rrp8Q9DB85 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.03■□□□□ 0.64
Rrp8Q9DB85 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Rrp8Q9DB85 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rrp8Q9DB85 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rrp8Q9DB85 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rrp8Q9DB85 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rrp8Q9DB85 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rrp8Q9DB85 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rrp8Q9DB85 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rrp8Q9DB85 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rrp8Q9DB85 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.02■□□□□ 0.64
Rrp8Q9DB85 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Rrp8Q9DB85 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rrp8Q9DB85 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rrp8Q9DB85 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.02■□□□□ 0.64
Rrp8Q9DB85 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rrp8Q9DB85 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.02■□□□□ 0.64
Rrp8Q9DB85 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Rrp8Q9DB85 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Rrp8Q9DB85 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rrp8Q9DB85 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.01■□□□□ 0.63
Rrp8Q9DB85 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rrp8Q9DB85 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rrp8Q9DB85 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rrp8Q9DB85 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rrp8Q9DB85 Gm13148-201ENSMUST00000118892 745 ntBASIC19.01■□□□□ 0.63
Rrp8Q9DB85 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rrp8Q9DB85 Gm8520-201ENSMUST00000186517 868 ntBASIC19.01■□□□□ 0.63
Rrp8Q9DB85 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.01■□□□□ 0.63
Rrp8Q9DB85 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.01■□□□□ 0.63
Rrp8Q9DB85 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rrp8Q9DB85 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rrp8Q9DB85 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rrp8Q9DB85 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rrp8Q9DB85 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Rrp8Q9DB85 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
Rrp8Q9DB85 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rrp8Q9DB85 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms