Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.68■■□□□ 1.06
Tube1Q9D6T1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.68■■□□□ 1.06
Tube1Q9D6T1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.68■■□□□ 1.06
Tube1Q9D6T1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tube1Q9D6T1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.68■■□□□ 1.06
Tube1Q9D6T1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.68■■□□□ 1.06
Tube1Q9D6T1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tube1Q9D6T1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.68■■□□□ 1.06
Tube1Q9D6T1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tube1Q9D6T1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tube1Q9D6T1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tube1Q9D6T1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tube1Q9D6T1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tube1Q9D6T1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tube1Q9D6T1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tube1Q9D6T1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tube1Q9D6T1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tube1Q9D6T1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tube1Q9D6T1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Tube1Q9D6T1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tube1Q9D6T1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.66■■□□□ 1.06
Tube1Q9D6T1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.66■■□□□ 1.06
Tube1Q9D6T1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.66■■□□□ 1.06
Tube1Q9D6T1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tube1Q9D6T1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Tube1Q9D6T1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.66■■□□□ 1.06
Tube1Q9D6T1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Tube1Q9D6T1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Tube1Q9D6T1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.64■■□□□ 1.05
Tube1Q9D6T1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tube1Q9D6T1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Tube1Q9D6T1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tube1Q9D6T1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Tube1Q9D6T1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tube1Q9D6T1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.64■■□□□ 1.05
Tube1Q9D6T1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Tube1Q9D6T1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tube1Q9D6T1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
Tube1Q9D6T1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tube1Q9D6T1 Mir6236-201ENSMUST00000184437 123 ntBASIC21.62■■□□□ 1.05
Tube1Q9D6T1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tube1Q9D6T1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.62■■□□□ 1.05
Tube1Q9D6T1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tube1Q9D6T1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tube1Q9D6T1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tube1Q9D6T1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.61■■□□□ 1.05
Tube1Q9D6T1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.61■■□□□ 1.05
Tube1Q9D6T1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Tube1Q9D6T1 Gm10493-201ENSMUST00000097270 612 ntBASIC21.61■■□□□ 1.05
Tube1Q9D6T1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tube1Q9D6T1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.61■■□□□ 1.05
Tube1Q9D6T1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tube1Q9D6T1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tube1Q9D6T1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tube1Q9D6T1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.6■■□□□ 1.05
Tube1Q9D6T1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tube1Q9D6T1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tube1Q9D6T1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tube1Q9D6T1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Tube1Q9D6T1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Tube1Q9D6T1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tube1Q9D6T1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tube1Q9D6T1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tube1Q9D6T1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.59■■□□□ 1.05
Tube1Q9D6T1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
Tube1Q9D6T1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tube1Q9D6T1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tube1Q9D6T1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tube1Q9D6T1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
Tube1Q9D6T1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tube1Q9D6T1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tube1Q9D6T1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tube1Q9D6T1 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.58■■□□□ 1.05
Tube1Q9D6T1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tube1Q9D6T1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms