Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShpkQ9D5J6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ShpkQ9D5J6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ShpkQ9D5J6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShpkQ9D5J6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ShpkQ9D5J6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShpkQ9D5J6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShpkQ9D5J6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShpkQ9D5J6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShpkQ9D5J6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
ShpkQ9D5J6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShpkQ9D5J6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.27■□□□□ 0.19
ShpkQ9D5J6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShpkQ9D5J6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ShpkQ9D5J6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ShpkQ9D5J6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShpkQ9D5J6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
ShpkQ9D5J6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShpkQ9D5J6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShpkQ9D5J6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShpkQ9D5J6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.26■□□□□ 0.19
ShpkQ9D5J6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShpkQ9D5J6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Gm8503-201ENSMUST00000118131 455 ntBASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShpkQ9D5J6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ShpkQ9D5J6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShpkQ9D5J6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShpkQ9D5J6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ShpkQ9D5J6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShpkQ9D5J6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShpkQ9D5J6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShpkQ9D5J6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShpkQ9D5J6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShpkQ9D5J6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Gm11599-201ENSMUST00000118720 878 ntBASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShpkQ9D5J6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ShpkQ9D5J6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ShpkQ9D5J6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShpkQ9D5J6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShpkQ9D5J6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ShpkQ9D5J6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShpkQ9D5J6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ShpkQ9D5J6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ShpkQ9D5J6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ShpkQ9D5J6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
ShpkQ9D5J6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ShpkQ9D5J6 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.21■□□□□ 0.18
ShpkQ9D5J6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShpkQ9D5J6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShpkQ9D5J6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ShpkQ9D5J6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms