Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd1Q9D0E3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lysmd1Q9D0E3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lysmd1Q9D0E3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lysmd1Q9D0E3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lysmd1Q9D0E3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.22■□□□□ 0.99
Lysmd1Q9D0E3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.22■□□□□ 0.99
Lysmd1Q9D0E3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.22■□□□□ 0.99
Lysmd1Q9D0E3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lysmd1Q9D0E3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lysmd1Q9D0E3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lysmd1Q9D0E3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lysmd1Q9D0E3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lysmd1Q9D0E3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Lysmd1Q9D0E3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.21■□□□□ 0.99
Lysmd1Q9D0E3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Lysmd1Q9D0E3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lysmd1Q9D0E3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Lysmd1Q9D0E3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lysmd1Q9D0E3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.2■□□□□ 0.98
Lysmd1Q9D0E3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Lysmd1Q9D0E3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Lysmd1Q9D0E3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lysmd1Q9D0E3 Gm33142-201ENSMUST00000193913 867 ntBASIC21.19■□□□□ 0.98
Lysmd1Q9D0E3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.19■□□□□ 0.98
Lysmd1Q9D0E3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lysmd1Q9D0E3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Lysmd1Q9D0E3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lysmd1Q9D0E3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.19■□□□□ 0.98
Lysmd1Q9D0E3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lysmd1Q9D0E3 Ank2-226ENSMUST00000189368 339 ntBASIC21.18■□□□□ 0.98
Lysmd1Q9D0E3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC21.18■□□□□ 0.98
Lysmd1Q9D0E3 Gm30025-201ENSMUST00000218555 728 ntBASIC21.18■□□□□ 0.98
Lysmd1Q9D0E3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Lysmd1Q9D0E3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Lysmd1Q9D0E3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd1Q9D0E3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd1Q9D0E3 Gm44771-201ENSMUST00000206975 626 ntBASIC21.17■□□□□ 0.98
Lysmd1Q9D0E3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd1Q9D0E3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd1Q9D0E3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd1Q9D0E3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd1Q9D0E3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd1Q9D0E3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lysmd1Q9D0E3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lysmd1Q9D0E3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 Gm23634-201ENSMUST00000175071 91 ntBASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 AC133598.3-202ENSMUST00000224219 531 ntBASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lysmd1Q9D0E3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lysmd1Q9D0E3 Gm2399-201ENSMUST00000104944 225 ntBASIC21.14■□□□□ 0.97
Lysmd1Q9D0E3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lysmd1Q9D0E3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lysmd1Q9D0E3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lysmd1Q9D0E3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lysmd1Q9D0E3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lysmd1Q9D0E3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lysmd1Q9D0E3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.13■□□□□ 0.97
Lysmd1Q9D0E3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.13■□□□□ 0.97
Lysmd1Q9D0E3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lysmd1Q9D0E3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lysmd1Q9D0E3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lysmd1Q9D0E3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lysmd1Q9D0E3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Lysmd1Q9D0E3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lysmd1Q9D0E3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lysmd1Q9D0E3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lysmd1Q9D0E3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lysmd1Q9D0E3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lysmd1Q9D0E3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms