Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl55Q9CZ83 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl55Q9CZ83 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl55Q9CZ83 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl55Q9CZ83 Gm10620-201ENSMUST00000098379 1332 ntBASIC12.75□□□□□ -0.37
Mrpl55Q9CZ83 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl55Q9CZ83 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Mrpl55Q9CZ83 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl55Q9CZ83 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl55Q9CZ83 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 AC116713.1-201ENSMUST00000215074 430 ntBASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl55Q9CZ83 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mrpl55Q9CZ83 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mrpl55Q9CZ83 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.71□□□□□ -0.37
Mrpl55Q9CZ83 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl55Q9CZ83 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl55Q9CZ83 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Mrpl55Q9CZ83 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Mrpl55Q9CZ83 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl55Q9CZ83 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Mrpl55Q9CZ83 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.71□□□□□ -0.37
Mrpl55Q9CZ83 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl55Q9CZ83 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mrpl55Q9CZ83 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC12.71□□□□□ -0.38
Mrpl55Q9CZ83 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Mrpl55Q9CZ83 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Mrpl55Q9CZ83 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
Mrpl55Q9CZ83 Gm12922-201ENSMUST00000120626 809 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms