Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smurf1Q9CUN6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smurf1Q9CUN6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.64■□□□□ 0.41
Smurf1Q9CUN6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smurf1Q9CUN6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smurf1Q9CUN6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Gm15546-201ENSMUST00000122095 826 ntBASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Smurf1Q9CUN6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smurf1Q9CUN6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smurf1Q9CUN6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smurf1Q9CUN6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smurf1Q9CUN6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smurf1Q9CUN6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smurf1Q9CUN6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smurf1Q9CUN6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smurf1Q9CUN6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smurf1Q9CUN6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smurf1Q9CUN6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Smurf1Q9CUN6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smurf1Q9CUN6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smurf1Q9CUN6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smurf1Q9CUN6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smurf1Q9CUN6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smurf1Q9CUN6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smurf1Q9CUN6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.57■□□□□ 0.4
Smurf1Q9CUN6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smurf1Q9CUN6 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.57■□□□□ 0.4
Smurf1Q9CUN6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smurf1Q9CUN6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms