Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Otud1Q9CUB6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otud1Q9CUB6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.42■□□□□ 0.54
Otud1Q9CUB6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Otud1Q9CUB6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Otud1Q9CUB6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Otud1Q9CUB6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otud1Q9CUB6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Otud1Q9CUB6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Otud1Q9CUB6 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.4■□□□□ 0.54
Otud1Q9CUB6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Otud1Q9CUB6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Otud1Q9CUB6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Otud1Q9CUB6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Otud1Q9CUB6 Gm27801-201ENSMUST00000184174 223 ntBASIC18.4■□□□□ 0.54
Otud1Q9CUB6 Gm42642-201ENSMUST00000200683 355 ntBASIC18.4■□□□□ 0.54
Otud1Q9CUB6 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.4■□□□□ 0.54
Otud1Q9CUB6 Gm9988-201ENSMUST00000069786 435 ntBASIC18.4■□□□□ 0.54
Otud1Q9CUB6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Otud1Q9CUB6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Otud1Q9CUB6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Otud1Q9CUB6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Otud1Q9CUB6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Otud1Q9CUB6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Otud1Q9CUB6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Otud1Q9CUB6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Otud1Q9CUB6 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.39■□□□□ 0.53
Otud1Q9CUB6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Otud1Q9CUB6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Otud1Q9CUB6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Otud1Q9CUB6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Otud1Q9CUB6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Otud1Q9CUB6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Otud1Q9CUB6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Otud1Q9CUB6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Otud1Q9CUB6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Otud1Q9CUB6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Otud1Q9CUB6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.38■□□□□ 0.53
Otud1Q9CUB6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Otud1Q9CUB6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Otud1Q9CUB6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Otud1Q9CUB6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Otud1Q9CUB6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.37■□□□□ 0.53
Otud1Q9CUB6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.37■□□□□ 0.53
Otud1Q9CUB6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Otud1Q9CUB6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Otud1Q9CUB6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Otud1Q9CUB6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Otud1Q9CUB6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Otud1Q9CUB6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Reep4-203ENSMUST00000226563 1444 ntBASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otud1Q9CUB6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Otud1Q9CUB6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Otud1Q9CUB6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Otud1Q9CUB6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.34■□□□□ 0.53
Otud1Q9CUB6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.34■□□□□ 0.53
Otud1Q9CUB6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.34■□□□□ 0.53
Otud1Q9CUB6 Gm42569-201ENSMUST00000200539 472 ntBASIC18.34■□□□□ 0.53
Otud1Q9CUB6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Otud1Q9CUB6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Otud1Q9CUB6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Otud1Q9CUB6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Otud1Q9CUB6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Otud1Q9CUB6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Otud1Q9CUB6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms