Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q9CR55 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Q9CR55 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q9CR55 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.98■□□□□ 0.47
Q9CR55 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.98■□□□□ 0.47
Q9CR55 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Q9CR55 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Q9CR55 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q9CR55 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q9CR55 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q9CR55 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q9CR55 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q9CR55 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Q9CR55 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Q9CR55 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.98■□□□□ 0.47
Q9CR55 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Q9CR55 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q9CR55 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Q9CR55 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q9CR55 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q9CR55 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q9CR55 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q9CR55 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.97■□□□□ 0.47
Q9CR55 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.97■□□□□ 0.47
Q9CR55 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Q9CR55 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q9CR55 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q9CR55 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Q9CR55 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Q9CR55 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q9CR55 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.97■□□□□ 0.47
Q9CR55 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Q9CR55 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Q9CR55 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Q9CR55 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Q9CR55 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Q9CR55 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Q9CR55 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q9CR55 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q9CR55 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.96■□□□□ 0.47
Q9CR55 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Q9CR55 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q9CR55 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q9CR55 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Q9CR55 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q9CR55 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q9CR55 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Q9CR55 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Q9CR55 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Q9CR55 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Q9CR55 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Q9CR55 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CR55 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CR55 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Q9CR55 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.95■□□□□ 0.46
Q9CR55 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.95■□□□□ 0.46
Q9CR55 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Q9CR55 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Q9CR55 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CR55 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CR55 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.95■□□□□ 0.46
Q9CR55 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q9CR55 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CR55 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CR55 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CR55 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CR55 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CR55 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Q9CR55 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Q9CR55 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q9CR55 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CR55 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CR55 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CR55 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CR55 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CR55 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CR55 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.93■□□□□ 0.46
Q9CR55 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.93■□□□□ 0.46
Q9CR55 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CR55 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Q9CR55 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CR55 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CR55 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Q9CR55 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CR55 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q9CR55 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Q9CR55 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Q9CR55 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CR55 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CR55 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CR55 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CR55 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CR55 Gm10420-201ENSMUST00000121713 882 ntBASIC17.92■□□□□ 0.46
Q9CR55 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Q9CR55 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CR55 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Q9CR55 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CR55 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Q9CR55 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.91■□□□□ 0.46
Q9CR55 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms