Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retreg3Q9CQV4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retreg3Q9CQV4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retreg3Q9CQV4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retreg3Q9CQV4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retreg3Q9CQV4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.58■□□□□ 0.73
Retreg3Q9CQV4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retreg3Q9CQV4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retreg3Q9CQV4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.58■□□□□ 0.73
Retreg3Q9CQV4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retreg3Q9CQV4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.58■□□□□ 0.72
Retreg3Q9CQV4 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.58■□□□□ 0.72
Retreg3Q9CQV4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Retreg3Q9CQV4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Retreg3Q9CQV4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retreg3Q9CQV4 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.58■□□□□ 0.72
Retreg3Q9CQV4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retreg3Q9CQV4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retreg3Q9CQV4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retreg3Q9CQV4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retreg3Q9CQV4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retreg3Q9CQV4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Retreg3Q9CQV4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Retreg3Q9CQV4 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.57■□□□□ 0.72
Retreg3Q9CQV4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Retreg3Q9CQV4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retreg3Q9CQV4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retreg3Q9CQV4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retreg3Q9CQV4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retreg3Q9CQV4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retreg3Q9CQV4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg3Q9CQV4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg3Q9CQV4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg3Q9CQV4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg3Q9CQV4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg3Q9CQV4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg3Q9CQV4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retreg3Q9CQV4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Retreg3Q9CQV4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg3Q9CQV4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg3Q9CQV4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg3Q9CQV4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg3Q9CQV4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retreg3Q9CQV4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Retreg3Q9CQV4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg3Q9CQV4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg3Q9CQV4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Retreg3Q9CQV4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg3Q9CQV4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg3Q9CQV4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg3Q9CQV4 Gm5874-201ENSMUST00000096101 508 ntBASIC19.52■□□□□ 0.72
Retreg3Q9CQV4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg3Q9CQV4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retreg3Q9CQV4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.52■□□□□ 0.71
Retreg3Q9CQV4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg3Q9CQV4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg3Q9CQV4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg3Q9CQV4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg3Q9CQV4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg3Q9CQV4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg3Q9CQV4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg3Q9CQV4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg3Q9CQV4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retreg3Q9CQV4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Retreg3Q9CQV4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg3Q9CQV4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg3Q9CQV4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg3Q9CQV4 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.5■□□□□ 0.71
Retreg3Q9CQV4 Gm40848-201ENSMUST00000221998 324 ntBASIC19.5■□□□□ 0.71
Retreg3Q9CQV4 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.5■□□□□ 0.71
Retreg3Q9CQV4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg3Q9CQV4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg3Q9CQV4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retreg3Q9CQV4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retreg3Q9CQV4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retreg3Q9CQV4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retreg3Q9CQV4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms