Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Lsm7Q9CQQ8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.68■□□□□ 0.74
Lsm7Q9CQQ8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm7Q9CQQ8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Lsm7Q9CQQ8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm7Q9CQQ8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm7Q9CQQ8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lsm7Q9CQQ8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.67■□□□□ 0.74
Lsm7Q9CQQ8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Lsm7Q9CQQ8 Gm7291-201ENSMUST00000199147 382 ntBASIC19.67■□□□□ 0.74
Lsm7Q9CQQ8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.67■□□□□ 0.74
Lsm7Q9CQQ8 Gm10033-202ENSMUST00000211874 928 ntBASIC19.67■□□□□ 0.74
Lsm7Q9CQQ8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm7Q9CQQ8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lsm7Q9CQQ8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lsm7Q9CQQ8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Lsm7Q9CQQ8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lsm7Q9CQQ8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Lsm7Q9CQQ8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Gm27405-201ENSMUST00000184201 112 ntBASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 AV356131-201ENSMUST00000206201 750 ntBASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lsm7Q9CQQ8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm7Q9CQQ8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm7Q9CQQ8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm7Q9CQQ8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm7Q9CQQ8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Lsm7Q9CQQ8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm7Q9CQQ8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Lsm7Q9CQQ8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm7Q9CQQ8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm7Q9CQQ8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lsm7Q9CQQ8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lsm7Q9CQQ8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.64■□□□□ 0.74
Lsm7Q9CQQ8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Lsm7Q9CQQ8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsm7Q9CQQ8 Gm10849-201ENSMUST00000100397 618 ntBASIC19.64■□□□□ 0.73
Lsm7Q9CQQ8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.64■□□□□ 0.73
Lsm7Q9CQQ8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.64■□□□□ 0.73
Lsm7Q9CQQ8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsm7Q9CQQ8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.64■□□□□ 0.73
Lsm7Q9CQQ8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsm7Q9CQQ8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsm7Q9CQQ8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsm7Q9CQQ8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lsm7Q9CQQ8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm7Q9CQQ8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm7Q9CQQ8 Reep4-203ENSMUST00000226563 1444 ntBASIC19.63■□□□□ 0.73
Lsm7Q9CQQ8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm7Q9CQQ8 Gm13234-201ENSMUST00000120010 747 ntBASIC19.63■□□□□ 0.73
Lsm7Q9CQQ8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.63■□□□□ 0.73
Lsm7Q9CQQ8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.63■□□□□ 0.73
Lsm7Q9CQQ8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Lsm7Q9CQQ8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.63■□□□□ 0.73
Lsm7Q9CQQ8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm7Q9CQQ8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lsm7Q9CQQ8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm7Q9CQQ8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm7Q9CQQ8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm7Q9CQQ8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm7Q9CQQ8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lsm7Q9CQQ8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lsm7Q9CQQ8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm7Q9CQQ8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Lsm7Q9CQQ8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Lsm7Q9CQQ8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.6■□□□□ 0.73
Lsm7Q9CQQ8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.6■□□□□ 0.73
Lsm7Q9CQQ8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.6■□□□□ 0.73
Lsm7Q9CQQ8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm7Q9CQQ8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm7Q9CQQ8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lsm7Q9CQQ8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm7Q9CQQ8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm7Q9CQQ8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm7Q9CQQ8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.59■□□□□ 0.73
Lsm7Q9CQQ8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm7Q9CQQ8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm7Q9CQQ8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms