Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Krt88Q9CPR6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.52■□□□□ 0.4
Krt88Q9CPR6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.52■□□□□ 0.4
Krt88Q9CPR6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt88Q9CPR6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt88Q9CPR6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt88Q9CPR6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Krt88Q9CPR6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Krt88Q9CPR6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Krt88Q9CPR6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Krt88Q9CPR6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Krt88Q9CPR6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Krt88Q9CPR6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt88Q9CPR6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt88Q9CPR6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt88Q9CPR6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Krt88Q9CPR6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Krt88Q9CPR6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt88Q9CPR6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.48■□□□□ 0.39
Krt88Q9CPR6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Krt88Q9CPR6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt88Q9CPR6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Krt88Q9CPR6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Krt88Q9CPR6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Krt88Q9CPR6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.47■□□□□ 0.39
Krt88Q9CPR6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt88Q9CPR6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt88Q9CPR6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt88Q9CPR6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Krt88Q9CPR6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt88Q9CPR6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt88Q9CPR6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt88Q9CPR6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt88Q9CPR6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.46■□□□□ 0.39
Krt88Q9CPR6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Krt88Q9CPR6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt88Q9CPR6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Krt88Q9CPR6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt88Q9CPR6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt88Q9CPR6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms