Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm38205-201ENSMUST00000192243 258 ntBASIC20.2■□□□□ 0.82
Cdh23Q99PF4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh23Q99PF4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh23Q99PF4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.2■□□□□ 0.82
Cdh23Q99PF4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh23Q99PF4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.19■□□□□ 0.82
Cdh23Q99PF4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh23Q99PF4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh23Q99PF4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cdh23Q99PF4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Cdh23Q99PF4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cdh23Q99PF4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.18■□□□□ 0.82
Cdh23Q99PF4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cdh23Q99PF4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.18■□□□□ 0.82
Cdh23Q99PF4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh23Q99PF4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh23Q99PF4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Cdh23Q99PF4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh23Q99PF4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh23Q99PF4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.18■□□□□ 0.82
Cdh23Q99PF4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh23Q99PF4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cdh23Q99PF4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cdh23Q99PF4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh23Q99PF4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh23Q99PF4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh23Q99PF4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.17■□□□□ 0.82
Cdh23Q99PF4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.17■□□□□ 0.82
Cdh23Q99PF4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh23Q99PF4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh23Q99PF4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.17■□□□□ 0.82
Cdh23Q99PF4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh23Q99PF4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh23Q99PF4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh23Q99PF4 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.16■□□□□ 0.82
Cdh23Q99PF4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.16■□□□□ 0.82
Cdh23Q99PF4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh23Q99PF4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Cdh23Q99PF4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.16■□□□□ 0.82
Cdh23Q99PF4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh23Q99PF4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cdh23Q99PF4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh23Q99PF4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh23Q99PF4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh23Q99PF4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.14■□□□□ 0.82
Cdh23Q99PF4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cdh23Q99PF4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh23Q99PF4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh23Q99PF4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.14■□□□□ 0.81
Cdh23Q99PF4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cdh23Q99PF4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cdh23Q99PF4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh23Q99PF4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh23Q99PF4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh23Q99PF4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh23Q99PF4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh23Q99PF4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh23Q99PF4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.13■□□□□ 0.81
Cdh23Q99PF4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.13■□□□□ 0.81
Cdh23Q99PF4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cdh23Q99PF4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh23Q99PF4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Cdh23Q99PF4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh23Q99PF4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh23Q99PF4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh23Q99PF4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh23Q99PF4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh23Q99PF4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh23Q99PF4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh23Q99PF4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh23Q99PF4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Gm11249-201ENSMUST00000117071 859 ntBASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Gm6433-201ENSMUST00000118634 875 ntBASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh23Q99PF4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms