Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trem2Q99NH8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trem2Q99NH8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trem2Q99NH8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trem2Q99NH8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trem2Q99NH8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trem2Q99NH8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trem2Q99NH8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trem2Q99NH8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trem2Q99NH8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.84■□□□□ 0.77
Trem2Q99NH8 Gm12251-201ENSMUST00000117893 792 ntBASIC19.84■□□□□ 0.77
Trem2Q99NH8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trem2Q99NH8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trem2Q99NH8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trem2Q99NH8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Trem2Q99NH8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trem2Q99NH8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trem2Q99NH8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trem2Q99NH8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.84■□□□□ 0.77
Trem2Q99NH8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trem2Q99NH8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trem2Q99NH8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trem2Q99NH8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trem2Q99NH8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trem2Q99NH8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Trem2Q99NH8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.83■□□□□ 0.76
Trem2Q99NH8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trem2Q99NH8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trem2Q99NH8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.76
Trem2Q99NH8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.83■□□□□ 0.76
Trem2Q99NH8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trem2Q99NH8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Trem2Q99NH8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Trem2Q99NH8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trem2Q99NH8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trem2Q99NH8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trem2Q99NH8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trem2Q99NH8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trem2Q99NH8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.82■□□□□ 0.76
Trem2Q99NH8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
Trem2Q99NH8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trem2Q99NH8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.82■□□□□ 0.76
Trem2Q99NH8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trem2Q99NH8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trem2Q99NH8 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.82■□□□□ 0.76
Trem2Q99NH8 Iqck-206ENSMUST00000208658 2891 ntBASIC19.82■□□□□ 0.76
Trem2Q99NH8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trem2Q99NH8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trem2Q99NH8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trem2Q99NH8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trem2Q99NH8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trem2Q99NH8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trem2Q99NH8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Trem2Q99NH8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trem2Q99NH8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.81■□□□□ 0.76
Trem2Q99NH8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.81■□□□□ 0.76
Trem2Q99NH8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trem2Q99NH8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trem2Q99NH8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trem2Q99NH8 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.81■□□□□ 0.76
Trem2Q99NH8 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.81■□□□□ 0.76
Trem2Q99NH8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trem2Q99NH8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trem2Q99NH8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trem2Q99NH8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trem2Q99NH8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trem2Q99NH8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.8■□□□□ 0.76
Trem2Q99NH8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trem2Q99NH8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trem2Q99NH8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.8■□□□□ 0.76
Trem2Q99NH8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trem2Q99NH8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trem2Q99NH8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trem2Q99NH8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trem2Q99NH8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trem2Q99NH8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trem2Q99NH8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trem2Q99NH8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trem2Q99NH8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trem2Q99NH8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trem2Q99NH8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.79■□□□□ 0.76
Trem2Q99NH8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trem2Q99NH8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trem2Q99NH8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trem2Q99NH8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trem2Q99NH8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms