Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smtnl1Q99LM3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smtnl1Q99LM3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Smtnl1Q99LM3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smtnl1Q99LM3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smtnl1Q99LM3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Smtnl1Q99LM3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smtnl1Q99LM3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smtnl1Q99LM3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smtnl1Q99LM3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.28■■□□□ 1
Smtnl1Q99LM3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smtnl1Q99LM3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.28■■□□□ 1
Smtnl1Q99LM3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smtnl1Q99LM3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Smtnl1Q99LM3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smtnl1Q99LM3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Smtnl1Q99LM3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smtnl1Q99LM3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smtnl1Q99LM3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.27■■□□□ 1
Smtnl1Q99LM3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smtnl1Q99LM3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Smtnl1Q99LM3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.27■■□□□ 1
Smtnl1Q99LM3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smtnl1Q99LM3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Smtnl1Q99LM3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smtnl1Q99LM3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smtnl1Q99LM3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.25■□□□□ 0.99
Smtnl1Q99LM3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smtnl1Q99LM3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
Smtnl1Q99LM3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smtnl1Q99LM3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smtnl1Q99LM3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smtnl1Q99LM3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smtnl1Q99LM3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smtnl1Q99LM3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smtnl1Q99LM3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smtnl1Q99LM3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.24■□□□□ 0.99
Smtnl1Q99LM3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Smtnl1Q99LM3 Golgb1-201ENSMUST00000023534 498 ntBASIC21.24■□□□□ 0.99
Smtnl1Q99LM3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smtnl1Q99LM3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smtnl1Q99LM3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smtnl1Q99LM3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.23■□□□□ 0.99
Smtnl1Q99LM3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smtnl1Q99LM3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Smtnl1Q99LM3 Gm12922-201ENSMUST00000120626 809 ntBASIC21.23■□□□□ 0.99
Smtnl1Q99LM3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.23■□□□□ 0.99
Smtnl1Q99LM3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.23■□□□□ 0.99
Smtnl1Q99LM3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smtnl1Q99LM3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smtnl1Q99LM3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smtnl1Q99LM3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Smtnl1Q99LM3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smtnl1Q99LM3 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.2■□□□□ 0.98
Smtnl1Q99LM3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smtnl1Q99LM3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smtnl1Q99LM3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smtnl1Q99LM3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smtnl1Q99LM3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smtnl1Q99LM3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smtnl1Q99LM3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Smtnl1Q99LM3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smtnl1Q99LM3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smtnl1Q99LM3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms