Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lysmd3Q99LE3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.22■□□□□ 0.83
Lysmd3Q99LE3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd3Q99LE3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.22■□□□□ 0.83
Lysmd3Q99LE3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd3Q99LE3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd3Q99LE3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd3Q99LE3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lysmd3Q99LE3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd3Q99LE3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Lysmd3Q99LE3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.21■□□□□ 0.83
Lysmd3Q99LE3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd3Q99LE3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd3Q99LE3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd3Q99LE3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd3Q99LE3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Lysmd3Q99LE3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lysmd3Q99LE3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Lysmd3Q99LE3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Gm42642-201ENSMUST00000200683 355 ntBASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lysmd3Q99LE3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd3Q99LE3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd3Q99LE3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd3Q99LE3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.18■□□□□ 0.82
Lysmd3Q99LE3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.18■□□□□ 0.82
Lysmd3Q99LE3 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.18■□□□□ 0.82
Lysmd3Q99LE3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lysmd3Q99LE3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lysmd3Q99LE3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lysmd3Q99LE3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lysmd3Q99LE3 Gm26571-201ENSMUST00000181399 666 ntBASIC20.17■□□□□ 0.82
Lysmd3Q99LE3 Gm9988-201ENSMUST00000069786 435 ntBASIC20.17■□□□□ 0.82
Lysmd3Q99LE3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lysmd3Q99LE3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd3Q99LE3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd3Q99LE3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Lysmd3Q99LE3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd3Q99LE3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd3Q99LE3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd3Q99LE3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd3Q99LE3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd3Q99LE3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lysmd3Q99LE3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lysmd3Q99LE3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lysmd3Q99LE3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lysmd3Q99LE3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms