Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk9Q99J95 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdk9Q99J95 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Cdk9Q99J95 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdk9Q99J95 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.51■□□□□ 0.71
Cdk9Q99J95 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdk9Q99J95 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cdk9Q99J95 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cdk9Q99J95 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cdk9Q99J95 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdk9Q99J95 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdk9Q99J95 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdk9Q99J95 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.5■□□□□ 0.71
Cdk9Q99J95 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk9Q99J95 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.49■□□□□ 0.71
Cdk9Q99J95 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.49■□□□□ 0.71
Cdk9Q99J95 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk9Q99J95 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk9Q99J95 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.49■□□□□ 0.71
Cdk9Q99J95 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk9Q99J95 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk9Q99J95 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk9Q99J95 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk9Q99J95 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Cdk9Q99J95 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk9Q99J95 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdk9Q99J95 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdk9Q99J95 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk9Q99J95 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk9Q99J95 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk9Q99J95 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk9Q99J95 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk9Q99J95 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cdk9Q99J95 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cdk9Q99J95 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cdk9Q99J95 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk9Q99J95 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk9Q99J95 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk9Q99J95 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdk9Q99J95 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Gm15820-201ENSMUST00000201566 728 ntBASIC19.46■□□□□ 0.71
Cdk9Q99J95 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk9Q99J95 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdk9Q99J95 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk9Q99J95 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk9Q99J95 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk9Q99J95 Grk6-206ENSMUST00000224995 2971 ntBASIC19.45■□□□□ 0.7
Cdk9Q99J95 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk9Q99J95 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.45■□□□□ 0.7
Cdk9Q99J95 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk9Q99J95 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.45■□□□□ 0.7
Cdk9Q99J95 Gm10399-202ENSMUST00000202768 748 ntBASIC19.45■□□□□ 0.7
Cdk9Q99J95 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cdk9Q99J95 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cdk9Q99J95 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms