Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm12821-201ENSMUST00000120022 600 ntBASIC20.25■□□□□ 0.83
Pcdhb1Q91Y08 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb1Q91Y08 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb1Q91Y08 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdhb1Q91Y08 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb1Q91Y08 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb1Q91Y08 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb1Q91Y08 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb1Q91Y08 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Pcdhb1Q91Y08 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.24■□□□□ 0.83
Pcdhb1Q91Y08 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb1Q91Y08 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb1Q91Y08 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb1Q91Y08 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb1Q91Y08 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb1Q91Y08 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb1Q91Y08 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb1Q91Y08 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb1Q91Y08 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb1Q91Y08 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb1Q91Y08 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb1Q91Y08 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcdhb1Q91Y08 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhb1Q91Y08 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb1Q91Y08 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb1Q91Y08 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb1Q91Y08 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb1Q91Y08 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.22■□□□□ 0.83
Pcdhb1Q91Y08 Mir7075-201ENSMUST00000184187 82 ntBASIC20.21■□□□□ 0.83
Pcdhb1Q91Y08 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.21■□□□□ 0.83
Pcdhb1Q91Y08 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.21■□□□□ 0.83
Pcdhb1Q91Y08 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb1Q91Y08 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb1Q91Y08 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb1Q91Y08 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb1Q91Y08 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Gm27454-201ENSMUST00000185090 204 ntBASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb1Q91Y08 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb1Q91Y08 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb1Q91Y08 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb1Q91Y08 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb1Q91Y08 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb1Q91Y08 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.16■□□□□ 0.82
Pcdhb1Q91Y08 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.16■□□□□ 0.82
Pcdhb1Q91Y08 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms