Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb3Q91XZ7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
Pcdhb3Q91XZ7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhb3Q91XZ7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb3Q91XZ7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhb3Q91XZ7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhb3Q91XZ7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 Gm40881-201ENSMUST00000223397 166 ntBASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhb3Q91XZ7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhb3Q91XZ7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pcdhb3Q91XZ7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb3Q91XZ7 Gm15039-201ENSMUST00000118914 875 ntBASIC19.33■□□□□ 0.68
Pcdhb3Q91XZ7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb3Q91XZ7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdhb3Q91XZ7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb3Q91XZ7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb3Q91XZ7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb3Q91XZ7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb3Q91XZ7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb3Q91XZ7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhb3Q91XZ7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb3Q91XZ7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb3Q91XZ7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb3Q91XZ7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb3Q91XZ7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb3Q91XZ7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb3Q91XZ7 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms