Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Pcdhb5Q91XZ5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb5Q91XZ5 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.05■■□□□ 1.28
Pcdhb5Q91XZ5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb5Q91XZ5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb5Q91XZ5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Pcdhb5Q91XZ5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Pcdhb5Q91XZ5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.05■■□□□ 1.28
Pcdhb5Q91XZ5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb5Q91XZ5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Pcdhb5Q91XZ5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb5Q91XZ5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb5Q91XZ5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb5Q91XZ5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb5Q91XZ5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb5Q91XZ5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb5Q91XZ5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.04■■□□□ 1.28
Pcdhb5Q91XZ5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Pcdhb5Q91XZ5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb5Q91XZ5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.02■■□□□ 1.28
Pcdhb5Q91XZ5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb5Q91XZ5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Pcdhb5Q91XZ5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb5Q91XZ5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC23.02■■□□□ 1.28
Pcdhb5Q91XZ5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb5Q91XZ5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb5Q91XZ5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Gm12441-201ENSMUST00000121806 588 ntBASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb5Q91XZ5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb5Q91XZ5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb5Q91XZ5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb5Q91XZ5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Pcdhb5Q91XZ5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
Pcdhb5Q91XZ5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.99■■□□□ 1.27
Pcdhb5Q91XZ5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb5Q91XZ5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.99■■□□□ 1.27
Pcdhb5Q91XZ5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb5Q91XZ5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Pcdhb5Q91XZ5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.98■■□□□ 1.27
Pcdhb5Q91XZ5 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.98■■□□□ 1.27
Pcdhb5Q91XZ5 Gm6420-201ENSMUST00000193885 723 ntBASIC22.98■■□□□ 1.27
Pcdhb5Q91XZ5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.98■■□□□ 1.27
Pcdhb5Q91XZ5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb5Q91XZ5 Gm6365-201ENSMUST00000054711 744 ntBASIC22.98■■□□□ 1.27
Pcdhb5Q91XZ5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Pcdhb5Q91XZ5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.98■■□□□ 1.27
Pcdhb5Q91XZ5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb5Q91XZ5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.97■■□□□ 1.27
Pcdhb5Q91XZ5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.97■■□□□ 1.27
Pcdhb5Q91XZ5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb5Q91XZ5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.97■■□□□ 1.27
Pcdhb5Q91XZ5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb5Q91XZ5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb5Q91XZ5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb5Q91XZ5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.97■■□□□ 1.27
Pcdhb5Q91XZ5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb5Q91XZ5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb5Q91XZ5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb5Q91XZ5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb5Q91XZ5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb5Q91XZ5 Gm13534-201ENSMUST00000121169 513 ntBASIC22.96■■□□□ 1.27
Pcdhb5Q91XZ5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb5Q91XZ5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb5Q91XZ5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms