Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb6Q91XZ4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb6Q91XZ4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.03■□□□□ 0.8
Pcdhb6Q91XZ4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb6Q91XZ4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb6Q91XZ4 Gm43173-201ENSMUST00000202246 593 ntBASIC20.03■□□□□ 0.8
Pcdhb6Q91XZ4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb6Q91XZ4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb6Q91XZ4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb6Q91XZ4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhb6Q91XZ4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb6Q91XZ4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb6Q91XZ4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb6Q91XZ4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb6Q91XZ4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb6Q91XZ4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Pcdhb6Q91XZ4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb6Q91XZ4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Pcdhb6Q91XZ4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb6Q91XZ4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb6Q91XZ4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb6Q91XZ4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb6Q91XZ4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdhb6Q91XZ4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdhb6Q91XZ4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb6Q91XZ4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb6Q91XZ4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb6Q91XZ4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb6Q91XZ4 Smad6-203ENSMUST00000179458 273 ntBASIC20■□□□□ 0.79
Pcdhb6Q91XZ4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb6Q91XZ4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb6Q91XZ4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdhb6Q91XZ4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb6Q91XZ4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb6Q91XZ4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb6Q91XZ4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.99■□□□□ 0.79
Pcdhb6Q91XZ4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb6Q91XZ4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb6Q91XZ4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb6Q91XZ4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb6Q91XZ4 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.99■□□□□ 0.79
Pcdhb6Q91XZ4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Gm8493-201ENSMUST00000196881 489 ntBASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Gm6139-201ENSMUST00000079261 882 ntBASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.98■□□□□ 0.79
Pcdhb6Q91XZ4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb6Q91XZ4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb6Q91XZ4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb6Q91XZ4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb6Q91XZ4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb6Q91XZ4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb6Q91XZ4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Pcdhb6Q91XZ4 Gm45417-201ENSMUST00000209533 758 ntBASIC19.97■□□□□ 0.79
Pcdhb6Q91XZ4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb6Q91XZ4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb6Q91XZ4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb6Q91XZ4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Pcdhb6Q91XZ4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb6Q91XZ4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Pcdhb6Q91XZ4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.96■□□□□ 0.79
Pcdhb6Q91XZ4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.96■□□□□ 0.79
Pcdhb6Q91XZ4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.96■□□□□ 0.79
Pcdhb6Q91XZ4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb6Q91XZ4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb6Q91XZ4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb6Q91XZ4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb6Q91XZ4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb6Q91XZ4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb6Q91XZ4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb6Q91XZ4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.95■□□□□ 0.78
Pcdhb6Q91XZ4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb6Q91XZ4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb6Q91XZ4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms