Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Pcdhgc5Q91XW9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgc5Q91XW9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.16■■□□□ 1.14
Pcdhgc5Q91XW9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgc5Q91XW9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgc5Q91XW9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Pcdhgc5Q91XW9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgc5Q91XW9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgc5Q91XW9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgc5Q91XW9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgc5Q91XW9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgc5Q91XW9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgc5Q91XW9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgc5Q91XW9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.15■■□□□ 1.14
Pcdhgc5Q91XW9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Pcdhgc5Q91XW9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgc5Q91XW9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgc5Q91XW9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.14■■□□□ 1.14
Pcdhgc5Q91XW9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhgc5Q91XW9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgc5Q91XW9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.14■■□□□ 1.13
Pcdhgc5Q91XW9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgc5Q91XW9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgc5Q91XW9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgc5Q91XW9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgc5Q91XW9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhgc5Q91XW9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgc5Q91XW9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc5Q91XW9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc5Q91XW9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc5Q91XW9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Pcdhgc5Q91XW9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc5Q91XW9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc5Q91XW9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.12■■□□□ 1.13
Pcdhgc5Q91XW9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.12■■□□□ 1.13
Pcdhgc5Q91XW9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgc5Q91XW9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Pcdhgc5Q91XW9 Reep4-203ENSMUST00000226563 1444 ntBASIC22.12■■□□□ 1.13
Pcdhgc5Q91XW9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.11■■□□□ 1.13
Pcdhgc5Q91XW9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc5Q91XW9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc5Q91XW9 Gm12933-201ENSMUST00000120203 872 ntBASIC22.11■■□□□ 1.13
Pcdhgc5Q91XW9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc5Q91XW9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc5Q91XW9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdhgc5Q91XW9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc5Q91XW9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc5Q91XW9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc5Q91XW9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgc5Q91XW9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgc5Q91XW9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgc5Q91XW9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgc5Q91XW9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Pcdhgc5Q91XW9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgc5Q91XW9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Pcdhgc5Q91XW9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.09■■□□□ 1.13
Pcdhgc5Q91XW9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Pcdhgc5Q91XW9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgc5Q91XW9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgc5Q91XW9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgc5Q91XW9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Pcdhgc5Q91XW9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.08■■□□□ 1.13
Pcdhgc5Q91XW9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
Pcdhgc5Q91XW9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgc5Q91XW9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
Pcdhgc5Q91XW9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Pcdhgc5Q91XW9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
Pcdhgc5Q91XW9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc5Q91XW9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc5Q91XW9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc5Q91XW9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc5Q91XW9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.07■■□□□ 1.12
Pcdhgc5Q91XW9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc5Q91XW9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc5Q91XW9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc5Q91XW9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgc5Q91XW9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms