Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndc1Q8VCB1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndc1Q8VCB1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ndc1Q8VCB1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ndc1Q8VCB1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ndc1Q8VCB1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ndc1Q8VCB1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ndc1Q8VCB1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ndc1Q8VCB1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ndc1Q8VCB1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.31■□□□□ 0.52
Ndc1Q8VCB1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ndc1Q8VCB1 Gm7291-201ENSMUST00000199147 382 ntBASIC18.31■□□□□ 0.52
Ndc1Q8VCB1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ndc1Q8VCB1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ndc1Q8VCB1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ndc1Q8VCB1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ndc1Q8VCB1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ndc1Q8VCB1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ndc1Q8VCB1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndc1Q8VCB1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.29■□□□□ 0.52
Ndc1Q8VCB1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndc1Q8VCB1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ndc1Q8VCB1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndc1Q8VCB1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ndc1Q8VCB1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ndc1Q8VCB1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndc1Q8VCB1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ndc1Q8VCB1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ndc1Q8VCB1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndc1Q8VCB1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Gm18671-201ENSMUST00000214826 683 ntBASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.28■□□□□ 0.52
Ndc1Q8VCB1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Gm27405-201ENSMUST00000184201 112 ntBASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Gm42778-201ENSMUST00000199644 553 ntBASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ndc1Q8VCB1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Ndc1Q8VCB1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ndc1Q8VCB1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Gm29257-201ENSMUST00000186115 639 ntBASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ndc1Q8VCB1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Gm10849-201ENSMUST00000100397 618 ntBASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Gm9988-201ENSMUST00000069786 435 ntBASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ndc1Q8VCB1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms