Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps39Q8R5L3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.45■□□□□ 0.7
Vps39Q8R5L3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps39Q8R5L3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
Vps39Q8R5L3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
Vps39Q8R5L3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps39Q8R5L3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps39Q8R5L3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Vps39Q8R5L3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.45■□□□□ 0.7
Vps39Q8R5L3 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.45■□□□□ 0.7
Vps39Q8R5L3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps39Q8R5L3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Vps39Q8R5L3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps39Q8R5L3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps39Q8R5L3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps39Q8R5L3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps39Q8R5L3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps39Q8R5L3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps39Q8R5L3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vps39Q8R5L3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps39Q8R5L3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps39Q8R5L3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps39Q8R5L3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps39Q8R5L3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps39Q8R5L3 Iqck-206ENSMUST00000208658 2891 ntBASIC19.41■□□□□ 0.7
Vps39Q8R5L3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps39Q8R5L3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps39Q8R5L3 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.41■□□□□ 0.7
Vps39Q8R5L3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps39Q8R5L3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.41■□□□□ 0.7
Vps39Q8R5L3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Vps39Q8R5L3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps39Q8R5L3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps39Q8R5L3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps39Q8R5L3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps39Q8R5L3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps39Q8R5L3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.4■□□□□ 0.7
Vps39Q8R5L3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps39Q8R5L3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps39Q8R5L3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps39Q8R5L3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Vps39Q8R5L3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps39Q8R5L3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps39Q8R5L3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps39Q8R5L3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps39Q8R5L3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps39Q8R5L3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.39■□□□□ 0.69
Vps39Q8R5L3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps39Q8R5L3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.39■□□□□ 0.69
Vps39Q8R5L3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps39Q8R5L3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps39Q8R5L3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Vps39Q8R5L3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps39Q8R5L3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Vps39Q8R5L3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.38■□□□□ 0.69
Vps39Q8R5L3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.38■□□□□ 0.69
Vps39Q8R5L3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps39Q8R5L3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps39Q8R5L3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps39Q8R5L3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps39Q8R5L3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps39Q8R5L3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps39Q8R5L3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps39Q8R5L3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps39Q8R5L3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps39Q8R5L3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps39Q8R5L3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps39Q8R5L3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps39Q8R5L3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps39Q8R5L3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps39Q8R5L3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps39Q8R5L3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps39Q8R5L3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.36■□□□□ 0.69
Vps39Q8R5L3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vps39Q8R5L3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms