Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cacnb1Q8R3Z5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacnb1Q8R3Z5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacnb1Q8R3Z5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Cacnb1Q8R3Z5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacnb1Q8R3Z5 Gm32390-201ENSMUST00000212713 1172 ntBASIC21.69■■□□□ 1.06
Cacnb1Q8R3Z5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacnb1Q8R3Z5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cacnb1Q8R3Z5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacnb1Q8R3Z5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacnb1Q8R3Z5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacnb1Q8R3Z5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacnb1Q8R3Z5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cacnb1Q8R3Z5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cacnb1Q8R3Z5 Gm37102-201ENSMUST00000195740 1105 ntBASIC21.68■■□□□ 1.06
Cacnb1Q8R3Z5 Gm43173-201ENSMUST00000202246 593 ntBASIC21.68■■□□□ 1.06
Cacnb1Q8R3Z5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.68■■□□□ 1.06
Cacnb1Q8R3Z5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cacnb1Q8R3Z5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cacnb1Q8R3Z5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cacnb1Q8R3Z5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cacnb1Q8R3Z5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cacnb1Q8R3Z5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cacnb1Q8R3Z5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cacnb1Q8R3Z5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Cacnb1Q8R3Z5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Cacnb1Q8R3Z5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cacnb1Q8R3Z5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cacnb1Q8R3Z5 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cacnb1Q8R3Z5 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.66■■□□□ 1.06
Cacnb1Q8R3Z5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.66■■□□□ 1.06
Cacnb1Q8R3Z5 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.66■■□□□ 1.06
Cacnb1Q8R3Z5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cacnb1Q8R3Z5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.66■■□□□ 1.06
Cacnb1Q8R3Z5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cacnb1Q8R3Z5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cacnb1Q8R3Z5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.65■■□□□ 1.06
Cacnb1Q8R3Z5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cacnb1Q8R3Z5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cacnb1Q8R3Z5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cacnb1Q8R3Z5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cacnb1Q8R3Z5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 Gm42660-201ENSMUST00000197733 947 ntBASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cacnb1Q8R3Z5 Golph3-202ENSMUST00000226517 2359 ntBASIC21.63■■□□□ 1.05
Cacnb1Q8R3Z5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cacnb1Q8R3Z5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cacnb1Q8R3Z5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
Cacnb1Q8R3Z5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Cacnb1Q8R3Z5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cacnb1Q8R3Z5 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cacnb1Q8R3Z5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cacnb1Q8R3Z5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cacnb1Q8R3Z5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cacnb1Q8R3Z5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cacnb1Q8R3Z5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cacnb1Q8R3Z5 AA386476-201ENSMUST00000098781 1665 ntBASIC21.61■■□□□ 1.05
Cacnb1Q8R3Z5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.61■■□□□ 1.05
Cacnb1Q8R3Z5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.61■■□□□ 1.05
Cacnb1Q8R3Z5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cacnb1Q8R3Z5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cacnb1Q8R3Z5 Notumos-201ENSMUST00000151998 2659 ntBASIC21.61■■□□□ 1.05
Cacnb1Q8R3Z5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacnb1Q8R3Z5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cacnb1Q8R3Z5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacnb1Q8R3Z5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cacnb1Q8R3Z5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms