Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Mir7075-201ENSMUST00000184187 82 ntBASIC18.4■□□□□ 0.54
Ubqln1Q8R317 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 AA386476-201ENSMUST00000098781 1665 ntBASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.4■□□□□ 0.54
Ubqln1Q8R317 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ubqln1Q8R317 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Ubqln1Q8R317 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ubqln1Q8R317 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubqln1Q8R317 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ubqln1Q8R317 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubqln1Q8R317 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ubqln1Q8R317 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ubqln1Q8R317 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubqln1Q8R317 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubqln1Q8R317 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubqln1Q8R317 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubqln1Q8R317 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.37■□□□□ 0.53
Ubqln1Q8R317 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubqln1Q8R317 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubqln1Q8R317 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubqln1Q8R317 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ubqln1Q8R317 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubqln1Q8R317 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubqln1Q8R317 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubqln1Q8R317 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln1Q8R317 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln1Q8R317 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln1Q8R317 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln1Q8R317 Gm12251-201ENSMUST00000117893 792 ntBASIC18.35■□□□□ 0.53
Ubqln1Q8R317 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln1Q8R317 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln1Q8R317 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln1Q8R317 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubqln1Q8R317 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Gm8493-201ENSMUST00000196881 489 ntBASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubqln1Q8R317 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ubqln1Q8R317 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Ubqln1Q8R317 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ubqln1Q8R317 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubqln1Q8R317 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ubqln1Q8R317 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.33■□□□□ 0.52
Ubqln1Q8R317 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.33■□□□□ 0.52
Ubqln1Q8R317 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubqln1Q8R317 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.33■□□□□ 0.52
Ubqln1Q8R317 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.33■□□□□ 0.52
Ubqln1Q8R317 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.33■□□□□ 0.52
Ubqln1Q8R317 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ubqln1Q8R317 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Ubqln1Q8R317 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubqln1Q8R317 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms