Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Chmp7Q8R1T1 Gm37035-201ENSMUST00000194809 2148 ntBASIC25.04■■□□□ 1.6
Chmp7Q8R1T1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Chmp7Q8R1T1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Chmp7Q8R1T1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC25.03■■□□□ 1.6
Chmp7Q8R1T1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Chmp7Q8R1T1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Chmp7Q8R1T1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Chmp7Q8R1T1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Chmp7Q8R1T1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Chmp7Q8R1T1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC25.02■■□□□ 1.6
Chmp7Q8R1T1 Gm43909-201ENSMUST00000203443 1876 ntBASIC25.02■■□□□ 1.6
Chmp7Q8R1T1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC25.01■■□□□ 1.6
Chmp7Q8R1T1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC25.01■■□□□ 1.59
Chmp7Q8R1T1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Chmp7Q8R1T1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC25.01■■□□□ 1.59
Chmp7Q8R1T1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Chmp7Q8R1T1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Chmp7Q8R1T1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC25■■□□□ 1.59
Chmp7Q8R1T1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Chmp7Q8R1T1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC25■■□□□ 1.59
Chmp7Q8R1T1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Chmp7Q8R1T1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC25■■□□□ 1.59
Chmp7Q8R1T1 Gm3807-201ENSMUST00000193520 1168 ntBASIC25■■□□□ 1.59
Chmp7Q8R1T1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC25■■□□□ 1.59
Chmp7Q8R1T1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Chmp7Q8R1T1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Chmp7Q8R1T1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC25■■□□□ 1.59
Chmp7Q8R1T1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Chmp7Q8R1T1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Chmp7Q8R1T1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Chmp7Q8R1T1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Chmp7Q8R1T1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Chmp7Q8R1T1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Chmp7Q8R1T1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Chmp7Q8R1T1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Chmp7Q8R1T1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Chmp7Q8R1T1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Chmp7Q8R1T1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Chmp7Q8R1T1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Chmp7Q8R1T1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Chmp7Q8R1T1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Chmp7Q8R1T1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Chmp7Q8R1T1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Chmp7Q8R1T1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC24.98■■□□□ 1.59
Chmp7Q8R1T1 Gm6420-201ENSMUST00000193885 723 ntBASIC24.98■■□□□ 1.59
Chmp7Q8R1T1 Gm4968-201ENSMUST00000071458 858 ntBASIC24.98■■□□□ 1.59
Chmp7Q8R1T1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Chmp7Q8R1T1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Chmp7Q8R1T1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Chmp7Q8R1T1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC24.97■■□□□ 1.59
Chmp7Q8R1T1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
Chmp7Q8R1T1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
Chmp7Q8R1T1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Chmp7Q8R1T1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Chmp7Q8R1T1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Chmp7Q8R1T1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Chmp7Q8R1T1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC24.97■■□□□ 1.59
Chmp7Q8R1T1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Gm7290-201ENSMUST00000104990 617 ntBASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Gm12918-201ENSMUST00000120234 636 ntBASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Gm15710-201ENSMUST00000121821 636 ntBASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Gm5075-201ENSMUST00000196916 622 ntBASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Gm6365-201ENSMUST00000054711 744 ntBASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC24.96■■□□□ 1.59
Chmp7Q8R1T1 Snhg20-203ENSMUST00000182811 2153 ntBASIC24.95■■□□□ 1.59
Chmp7Q8R1T1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Chmp7Q8R1T1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Chmp7Q8R1T1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
Chmp7Q8R1T1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Chmp7Q8R1T1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC24.95■■□□□ 1.58
Chmp7Q8R1T1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Chmp7Q8R1T1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Chmp7Q8R1T1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Chmp7Q8R1T1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Chmp7Q8R1T1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.95■■□□□ 1.58
Chmp7Q8R1T1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
Chmp7Q8R1T1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC24.95■■□□□ 1.58
Chmp7Q8R1T1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Chmp7Q8R1T1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24.94■■□□□ 1.58
Chmp7Q8R1T1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Chmp7Q8R1T1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Chmp7Q8R1T1 Gm13534-201ENSMUST00000121169 513 ntBASIC24.94■■□□□ 1.58
Chmp7Q8R1T1 Nespas-201ENSMUST00000143738 1083 ntBASIC24.94■■□□□ 1.58
Chmp7Q8R1T1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Chmp7Q8R1T1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Chmp7Q8R1T1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Chmp7Q8R1T1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Chmp7Q8R1T1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms