Protein–RNA interactions for Protein: Q8R1S9

Slc38a4, Sodium-coupled neutral amino acid transporter 4, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc38a4Q8R1S9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Slc38a4Q8R1S9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
Slc38a4Q8R1S9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc38a4Q8R1S9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.39■□□□□ 0.53
Slc38a4Q8R1S9 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.39■□□□□ 0.53
Slc38a4Q8R1S9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
Slc38a4Q8R1S9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc38a4Q8R1S9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc38a4Q8R1S9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc38a4Q8R1S9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc38a4Q8R1S9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc38a4Q8R1S9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc38a4Q8R1S9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc38a4Q8R1S9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc38a4Q8R1S9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc38a4Q8R1S9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc38a4Q8R1S9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc38a4Q8R1S9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.36■□□□□ 0.53
Slc38a4Q8R1S9 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.36■□□□□ 0.53
Slc38a4Q8R1S9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc38a4Q8R1S9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc38a4Q8R1S9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc38a4Q8R1S9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Slc38a4Q8R1S9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc38a4Q8R1S9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc38a4Q8R1S9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.35■□□□□ 0.53
Slc38a4Q8R1S9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc38a4Q8R1S9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Slc38a4Q8R1S9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc38a4Q8R1S9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc38a4Q8R1S9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc38a4Q8R1S9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc38a4Q8R1S9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc38a4Q8R1S9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc38a4Q8R1S9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.33■□□□□ 0.53
Slc38a4Q8R1S9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc38a4Q8R1S9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc38a4Q8R1S9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc38a4Q8R1S9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Slc38a4Q8R1S9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc38a4Q8R1S9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc38a4Q8R1S9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc38a4Q8R1S9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Slc38a4Q8R1S9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc38a4Q8R1S9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Slc38a4Q8R1S9 Gm13241-201ENSMUST00000094493 780 ntBASIC18.32■□□□□ 0.52
Slc38a4Q8R1S9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc38a4Q8R1S9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc38a4Q8R1S9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc38a4Q8R1S9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms