Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Alms1Q8K4E0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alms1Q8K4E0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Alms1Q8K4E0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.16■□□□□ 0.66
Alms1Q8K4E0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.16■□□□□ 0.66
Alms1Q8K4E0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Alms1Q8K4E0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Gm20049-201ENSMUST00000219950 730 ntBASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Alms1Q8K4E0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Alms1Q8K4E0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Alms1Q8K4E0 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.14■□□□□ 0.65
Alms1Q8K4E0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.14■□□□□ 0.65
Alms1Q8K4E0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alms1Q8K4E0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Alms1Q8K4E0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Alms1Q8K4E0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Alms1Q8K4E0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Alms1Q8K4E0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alms1Q8K4E0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alms1Q8K4E0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Gm37856-201ENSMUST00000191634 999 ntBASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.13■□□□□ 0.65
Alms1Q8K4E0 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Alms1Q8K4E0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Gm13168-201ENSMUST00000121771 632 ntBASIC19.12■□□□□ 0.65
Alms1Q8K4E0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Alms1Q8K4E0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alms1Q8K4E0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Alms1Q8K4E0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alms1Q8K4E0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alms1Q8K4E0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alms1Q8K4E0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alms1Q8K4E0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Alms1Q8K4E0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alms1Q8K4E0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alms1Q8K4E0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.1■□□□□ 0.65
Alms1Q8K4E0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.1■□□□□ 0.65
Alms1Q8K4E0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alms1Q8K4E0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Alms1Q8K4E0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Alms1Q8K4E0 Gm26524-201ENSMUST00000192339 390 ntBASIC19.1■□□□□ 0.65
Alms1Q8K4E0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alms1Q8K4E0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alms1Q8K4E0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alms1Q8K4E0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Alms1Q8K4E0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Alms1Q8K4E0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Alms1Q8K4E0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Alms1Q8K4E0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Alms1Q8K4E0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Alms1Q8K4E0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Alms1Q8K4E0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.09■□□□□ 0.65
Alms1Q8K4E0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Alms1Q8K4E0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Alms1Q8K4E0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Alms1Q8K4E0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Alms1Q8K4E0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.08■□□□□ 0.65
Alms1Q8K4E0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Alms1Q8K4E0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Alms1Q8K4E0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Alms1Q8K4E0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Alms1Q8K4E0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Alms1Q8K4E0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Alms1Q8K4E0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Alms1Q8K4E0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Alms1Q8K4E0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Alms1Q8K4E0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Alms1Q8K4E0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms