Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Abca8bQ8K440 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Abca8bQ8K440 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC29.32■■■□□ 2.28
Abca8bQ8K440 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Abca8bQ8K440 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Abca8bQ8K440 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
Abca8bQ8K440 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
Abca8bQ8K440 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC29.31■■■□□ 2.28
Abca8bQ8K440 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC29.31■■■□□ 2.28
Abca8bQ8K440 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Abca8bQ8K440 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Abca8bQ8K440 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Abca8bQ8K440 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
Abca8bQ8K440 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC29.31■■■□□ 2.28
Abca8bQ8K440 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Abca8bQ8K440 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Abca8bQ8K440 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC29.3■■■□□ 2.28
Abca8bQ8K440 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Abca8bQ8K440 Gm43909-201ENSMUST00000203443 1876 ntBASIC29.3■■■□□ 2.28
Abca8bQ8K440 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Abca8bQ8K440 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
Abca8bQ8K440 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Abca8bQ8K440 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Abca8bQ8K440 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Abca8bQ8K440 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Abca8bQ8K440 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Abca8bQ8K440 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Abca8bQ8K440 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC29.29■■■□□ 2.28
Abca8bQ8K440 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Abca8bQ8K440 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
Abca8bQ8K440 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Abca8bQ8K440 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
Abca8bQ8K440 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC29.28■■■□□ 2.28
Abca8bQ8K440 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Abca8bQ8K440 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Abca8bQ8K440 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Abca8bQ8K440 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Abca8bQ8K440 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Abca8bQ8K440 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
Abca8bQ8K440 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Abca8bQ8K440 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC29.27■■■□□ 2.28
Abca8bQ8K440 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC29.27■■■□□ 2.28
Abca8bQ8K440 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Abca8bQ8K440 Gm13509-201ENSMUST00000119733 1308 ntBASIC29.27■■■□□ 2.28
Abca8bQ8K440 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC29.27■■■□□ 2.28
Abca8bQ8K440 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
Abca8bQ8K440 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC29.27■■■□□ 2.28
Abca8bQ8K440 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC29.27■■■□□ 2.28
Abca8bQ8K440 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Abca8bQ8K440 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Abca8bQ8K440 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Abca8bQ8K440 Dio3-201ENSMUST00000097228 1449 ntBASIC29.25■■■□□ 2.27
Abca8bQ8K440 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
Abca8bQ8K440 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Abca8bQ8K440 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Abca8bQ8K440 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC29.25■■■□□ 2.27
Abca8bQ8K440 Gm27032-201ENSMUST00000183124 1116 ntBASIC29.25■■■□□ 2.27
Abca8bQ8K440 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC29.25■■■□□ 2.27
Abca8bQ8K440 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC29.25■■■□□ 2.27
Abca8bQ8K440 Krtap5-1-202ENSMUST00000188274 742 ntBASIC29.24■■■□□ 2.27
Abca8bQ8K440 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC29.23■■■□□ 2.27
Abca8bQ8K440 Gm6576-201ENSMUST00000169678 883 ntBASIC29.23■■■□□ 2.27
Abca8bQ8K440 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Abca8bQ8K440 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Abca8bQ8K440 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Abca8bQ8K440 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Abca8bQ8K440 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Abca8bQ8K440 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Abca8bQ8K440 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Abca8bQ8K440 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Abca8bQ8K440 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Abca8bQ8K440 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Abca8bQ8K440 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC29.21■■■□□ 2.27
Abca8bQ8K440 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Abca8bQ8K440 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Abca8bQ8K440 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Abca8bQ8K440 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Abca8bQ8K440 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Abca8bQ8K440 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Abca8bQ8K440 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Abca8bQ8K440 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.27
Abca8bQ8K440 Gm21596-201ENSMUST00000178049 1316 ntBASIC29.2■■■□□ 2.27
Abca8bQ8K440 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Abca8bQ8K440 AA386476-201ENSMUST00000098781 1665 ntBASIC29.2■■■□□ 2.26
Abca8bQ8K440 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Abca8bQ8K440 Gm10698-201ENSMUST00000182663 604 ntBASIC29.2■■■□□ 2.26
Abca8bQ8K440 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC29.2■■■□□ 2.26
Abca8bQ8K440 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Abca8bQ8K440 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
Abca8bQ8K440 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Abca8bQ8K440 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Abca8bQ8K440 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Abca8bQ8K440 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Abca8bQ8K440 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
Abca8bQ8K440 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Abca8bQ8K440 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC29.18■■■□□ 2.26
Abca8bQ8K440 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Abca8bQ8K440 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
Abca8bQ8K440 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Abca8bQ8K440 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC29.17■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms