Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cystm1Q8K353 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.15□□□□□ -0.46
Cystm1Q8K353 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.15□□□□□ -0.46
Cystm1Q8K353 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.15□□□□□ -0.46
Cystm1Q8K353 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cystm1Q8K353 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.15□□□□□ -0.47
Cystm1Q8K353 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cystm1Q8K353 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cystm1Q8K353 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cystm1Q8K353 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cystm1Q8K353 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.13□□□□□ -0.47
Cystm1Q8K353 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cystm1Q8K353 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cystm1Q8K353 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Dmtn-210ENSMUST00000228824 2377 ntBASIC12.12□□□□□ -0.47
Cystm1Q8K353 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.12□□□□□ -0.47
Cystm1Q8K353 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cystm1Q8K353 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.11□□□□□ -0.47
Cystm1Q8K353 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cystm1Q8K353 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cystm1Q8K353 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms