Protein–RNA interactions for Protein: Q8K268

Abcf3, ATP-binding cassette sub-family F member 3, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf3Q8K268 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Abcf3Q8K268 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.48■□□□□ 0.71
Abcf3Q8K268 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.47■□□□□ 0.71
Abcf3Q8K268 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Abcf3Q8K268 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf3Q8K268 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.47■□□□□ 0.71
Abcf3Q8K268 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.47■□□□□ 0.71
Abcf3Q8K268 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf3Q8K268 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf3Q8K268 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcf3Q8K268 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Abcf3Q8K268 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Abcf3Q8K268 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcf3Q8K268 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.45■□□□□ 0.7
Abcf3Q8K268 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.45■□□□□ 0.7
Abcf3Q8K268 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf3Q8K268 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Abcf3Q8K268 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.44■□□□□ 0.7
Abcf3Q8K268 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf3Q8K268 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf3Q8K268 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf3Q8K268 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.42■□□□□ 0.7
Abcf3Q8K268 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf3Q8K268 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.42■□□□□ 0.7
Abcf3Q8K268 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf3Q8K268 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Abcf3Q8K268 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf3Q8K268 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf3Q8K268 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Abcf3Q8K268 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Abcf3Q8K268 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.41■□□□□ 0.7
Abcf3Q8K268 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf3Q8K268 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms