Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Notumos-201ENSMUST00000151998 2659 ntBASIC22.5■■□□□ 1.19
Rtn1Q8K0T0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rtn1Q8K0T0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Rtn1Q8K0T0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rtn1Q8K0T0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rtn1Q8K0T0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.5■■□□□ 1.19
Rtn1Q8K0T0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Rtn1Q8K0T0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rtn1Q8K0T0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.5■■□□□ 1.19
Rtn1Q8K0T0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rtn1Q8K0T0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn1Q8K0T0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn1Q8K0T0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn1Q8K0T0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn1Q8K0T0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.49■■□□□ 1.19
Rtn1Q8K0T0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn1Q8K0T0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn1Q8K0T0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn1Q8K0T0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn1Q8K0T0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn1Q8K0T0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rtn1Q8K0T0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rtn1Q8K0T0 Gm11421-201ENSMUST00000122124 294 ntBASIC22.48■■□□□ 1.19
Rtn1Q8K0T0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.48■■□□□ 1.19
Rtn1Q8K0T0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.48■■□□□ 1.19
Rtn1Q8K0T0 Gm26833-201ENSMUST00000180899 440 ntBASIC22.48■■□□□ 1.19
Rtn1Q8K0T0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Rtn1Q8K0T0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rtn1Q8K0T0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtn1Q8K0T0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
Rtn1Q8K0T0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rtn1Q8K0T0 Gm40848-201ENSMUST00000221998 324 ntBASIC22.47■■□□□ 1.19
Rtn1Q8K0T0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rtn1Q8K0T0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtn1Q8K0T0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Rtn1Q8K0T0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtn1Q8K0T0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rtn1Q8K0T0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rtn1Q8K0T0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.46■■□□□ 1.19
Rtn1Q8K0T0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rtn1Q8K0T0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rtn1Q8K0T0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Rtn1Q8K0T0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC22.45■■□□□ 1.19
Rtn1Q8K0T0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rtn1Q8K0T0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.45■■□□□ 1.18
Rtn1Q8K0T0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Rtn1Q8K0T0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rtn1Q8K0T0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rtn1Q8K0T0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rtn1Q8K0T0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rtn1Q8K0T0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rtn1Q8K0T0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Rtn1Q8K0T0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Rtn1Q8K0T0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rtn1Q8K0T0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.44■■□□□ 1.18
Rtn1Q8K0T0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rtn1Q8K0T0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rtn1Q8K0T0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Rtn1Q8K0T0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rtn1Q8K0T0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtn1Q8K0T0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtn1Q8K0T0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtn1Q8K0T0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rtn1Q8K0T0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rtn1Q8K0T0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
Rtn1Q8K0T0 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.43■■□□□ 1.18
Rtn1Q8K0T0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.43■■□□□ 1.18
Rtn1Q8K0T0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtn1Q8K0T0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtn1Q8K0T0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rtn1Q8K0T0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rtn1Q8K0T0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
Rtn1Q8K0T0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rtn1Q8K0T0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rtn1Q8K0T0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rtn1Q8K0T0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rtn1Q8K0T0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Rtn1Q8K0T0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rtn1Q8K0T0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rtn1Q8K0T0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rtn1Q8K0T0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rtn1Q8K0T0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.41■■□□□ 1.18
Rtn1Q8K0T0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rtn1Q8K0T0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Rtn1Q8K0T0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rtn1Q8K0T0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rtn1Q8K0T0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rtn1Q8K0T0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
Rtn1Q8K0T0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rtn1Q8K0T0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rtn1Q8K0T0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rtn1Q8K0T0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rtn1Q8K0T0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Rtn1Q8K0T0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rtn1Q8K0T0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rtn1Q8K0T0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Rtn1Q8K0T0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rtn1Q8K0T0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rtn1Q8K0T0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Rtn1Q8K0T0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms