Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.8■□□□□ 0.76
CopaQ8CIE6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.8■□□□□ 0.76
CopaQ8CIE6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopaQ8CIE6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CopaQ8CIE6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.79■□□□□ 0.76
CopaQ8CIE6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.79■□□□□ 0.76
CopaQ8CIE6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopaQ8CIE6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopaQ8CIE6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CopaQ8CIE6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CopaQ8CIE6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CopaQ8CIE6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CopaQ8CIE6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CopaQ8CIE6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CopaQ8CIE6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.77■□□□□ 0.76
CopaQ8CIE6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CopaQ8CIE6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CopaQ8CIE6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CopaQ8CIE6 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.76■□□□□ 0.75
CopaQ8CIE6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopaQ8CIE6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Gm26833-201ENSMUST00000180899 440 ntBASIC19.76■□□□□ 0.75
CopaQ8CIE6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CopaQ8CIE6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.75■□□□□ 0.75
CopaQ8CIE6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CopaQ8CIE6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CopaQ8CIE6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CopaQ8CIE6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CopaQ8CIE6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CopaQ8CIE6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CopaQ8CIE6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopaQ8CIE6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopaQ8CIE6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopaQ8CIE6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopaQ8CIE6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CopaQ8CIE6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CopaQ8CIE6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CopaQ8CIE6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.73■□□□□ 0.75
CopaQ8CIE6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CopaQ8CIE6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopaQ8CIE6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopaQ8CIE6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CopaQ8CIE6 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.72■□□□□ 0.75
CopaQ8CIE6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopaQ8CIE6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopaQ8CIE6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CopaQ8CIE6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.71■□□□□ 0.75
CopaQ8CIE6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CopaQ8CIE6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms