Protein–RNA interactions for Protein: Q8CI15

Sphk1, Sphingosine kinase 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sphk1Q8CI15 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.4■□□□□ 0.7
Sphk1Q8CI15 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.4■□□□□ 0.7
Sphk1Q8CI15 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sphk1Q8CI15 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Sphk1Q8CI15 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sphk1Q8CI15 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sphk1Q8CI15 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sphk1Q8CI15 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.39■□□□□ 0.69
Sphk1Q8CI15 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.39■□□□□ 0.69
Sphk1Q8CI15 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sphk1Q8CI15 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sphk1Q8CI15 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sphk1Q8CI15 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sphk1Q8CI15 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Sphk1Q8CI15 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sphk1Q8CI15 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sphk1Q8CI15 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sphk1Q8CI15 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sphk1Q8CI15 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.38■□□□□ 0.69
Sphk1Q8CI15 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sphk1Q8CI15 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sphk1Q8CI15 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Sphk1Q8CI15 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sphk1Q8CI15 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.38■□□□□ 0.69
Sphk1Q8CI15 AA386476-201ENSMUST00000098781 1665 ntBASIC19.38■□□□□ 0.69
Sphk1Q8CI15 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sphk1Q8CI15 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Gm7514-201ENSMUST00000209475 934 ntBASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sphk1Q8CI15 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sphk1Q8CI15 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sphk1Q8CI15 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sphk1Q8CI15 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sphk1Q8CI15 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sphk1Q8CI15 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.36■□□□□ 0.69
Sphk1Q8CI15 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sphk1Q8CI15 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.36■□□□□ 0.69
Sphk1Q8CI15 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.36■□□□□ 0.69
Sphk1Q8CI15 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.36■□□□□ 0.69
Sphk1Q8CI15 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sphk1Q8CI15 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sphk1Q8CI15 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sphk1Q8CI15 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sphk1Q8CI15 Gm12933-201ENSMUST00000120203 872 ntBASIC19.35■□□□□ 0.69
Sphk1Q8CI15 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sphk1Q8CI15 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sphk1Q8CI15 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sphk1Q8CI15 Gm10602-201ENSMUST00000098239 609 ntBASIC19.35■□□□□ 0.69
Sphk1Q8CI15 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sphk1Q8CI15 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sphk1Q8CI15 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sphk1Q8CI15 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sphk1Q8CI15 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sphk1Q8CI15 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.34■□□□□ 0.69
Sphk1Q8CI15 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sphk1Q8CI15 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sphk1Q8CI15 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sphk1Q8CI15 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sphk1Q8CI15 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sphk1Q8CI15 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sphk1Q8CI15 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sphk1Q8CI15 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sphk1Q8CI15 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sphk1Q8CI15 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sphk1Q8CI15 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.32■□□□□ 0.68
Sphk1Q8CI15 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.32■□□□□ 0.68
Sphk1Q8CI15 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.32■□□□□ 0.68
Sphk1Q8CI15 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sphk1Q8CI15 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sphk1Q8CI15 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sphk1Q8CI15 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sphk1Q8CI15 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sphk1Q8CI15 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sphk1Q8CI15 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sphk1Q8CI15 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Iqck-206ENSMUST00000208658 2891 ntBASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sphk1Q8CI15 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms