Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Calcoco1Q8CGU1 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.16■□□□□ 0.82
Calcoco1Q8CGU1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Calcoco1Q8CGU1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Calcoco1Q8CGU1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Calcoco1Q8CGU1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Calcoco1Q8CGU1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.15■□□□□ 0.82
Calcoco1Q8CGU1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Calcoco1Q8CGU1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Calcoco1Q8CGU1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Calcoco1Q8CGU1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Calcoco1Q8CGU1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Calcoco1Q8CGU1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Calcoco1Q8CGU1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.14■□□□□ 0.82
Calcoco1Q8CGU1 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calcoco1Q8CGU1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calcoco1Q8CGU1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Calcoco1Q8CGU1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calcoco1Q8CGU1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Calcoco1Q8CGU1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calcoco1Q8CGU1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calcoco1Q8CGU1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Calcoco1Q8CGU1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calcoco1Q8CGU1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calcoco1Q8CGU1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Calcoco1Q8CGU1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calcoco1Q8CGU1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calcoco1Q8CGU1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calcoco1Q8CGU1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Calcoco1Q8CGU1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Calcoco1Q8CGU1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Calcoco1Q8CGU1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Calcoco1Q8CGU1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Calcoco1Q8CGU1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Calcoco1Q8CGU1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Calcoco1Q8CGU1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.08■□□□□ 0.8
Calcoco1Q8CGU1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Calcoco1Q8CGU1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Calcoco1Q8CGU1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms