Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rp1l1Q8CGM2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rp1l1Q8CGM2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rp1l1Q8CGM2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rp1l1Q8CGM2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rp1l1Q8CGM2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.59■□□□□ 0.89
Rp1l1Q8CGM2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rp1l1Q8CGM2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rp1l1Q8CGM2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.58■□□□□ 0.89
Rp1l1Q8CGM2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.58■□□□□ 0.89
Rp1l1Q8CGM2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Rp1l1Q8CGM2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rp1l1Q8CGM2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rp1l1Q8CGM2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rp1l1Q8CGM2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rp1l1Q8CGM2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rp1l1Q8CGM2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rp1l1Q8CGM2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.57■□□□□ 0.88
Rp1l1Q8CGM2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Rp1l1Q8CGM2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rp1l1Q8CGM2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rp1l1Q8CGM2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rp1l1Q8CGM2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rp1l1Q8CGM2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.56■□□□□ 0.88
Rp1l1Q8CGM2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1l1Q8CGM2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rp1l1Q8CGM2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1l1Q8CGM2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1l1Q8CGM2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1l1Q8CGM2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1l1Q8CGM2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1l1Q8CGM2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rp1l1Q8CGM2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rp1l1Q8CGM2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.55■□□□□ 0.88
Rp1l1Q8CGM2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rp1l1Q8CGM2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1l1Q8CGM2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1l1Q8CGM2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1l1Q8CGM2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1l1Q8CGM2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.55■□□□□ 0.88
Rp1l1Q8CGM2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.54■□□□□ 0.88
Rp1l1Q8CGM2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rp1l1Q8CGM2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rp1l1Q8CGM2 Gm12896-201ENSMUST00000118430 226 ntBASIC20.52■□□□□ 0.88
Rp1l1Q8CGM2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.52■□□□□ 0.88
Rp1l1Q8CGM2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rp1l1Q8CGM2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rp1l1Q8CGM2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rp1l1Q8CGM2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rp1l1Q8CGM2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Rp1l1Q8CGM2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rp1l1Q8CGM2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rp1l1Q8CGM2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rp1l1Q8CGM2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.51■□□□□ 0.87
Rp1l1Q8CGM2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Rp1l1Q8CGM2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rp1l1Q8CGM2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rp1l1Q8CGM2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 Dio3-201ENSMUST00000097228 1449 ntBASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 Gm15565-201ENSMUST00000118890 427 ntBASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rp1l1Q8CGM2 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.49■□□□□ 0.87
Rp1l1Q8CGM2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rp1l1Q8CGM2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rp1l1Q8CGM2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rp1l1Q8CGM2 Gm7860-201ENSMUST00000121190 879 ntBASIC20.49■□□□□ 0.87
Rp1l1Q8CGM2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.49■□□□□ 0.87
Rp1l1Q8CGM2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms